Fast, sensitive and accurate integration of single-cell data with Harmony I Korsunsky, N Millard, J Fan, K Slowikowski, F Zhang, K Wei, ... Nature methods 16 (12), 1289-1296, 2019 | 3908 | 2019 |
Defining inflammatory cell states in rheumatoid arthritis joint synovial tissues by integrating single-cell transcriptomics and mass cytometry F Zhang, K Wei, K Slowikowski, CY Fonseka, DA Rao, S Kelly, ... Nature immunology 20 (7), 928, 2019 | 871 | 2019 |
The immune cell landscape in kidneys of patients with lupus nephritis A Arazi, DA Rao, CC Berthier, A Davidson, Y Liu, PJ Hoover, A Chicoine, ... Nature immunology 20 (7), 902-914, 2019 | 581 | 2019 |
Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways E Der, H Suryawanshi, P Morozov, M Kustagi, B Goilav, S Ranabothu, ... Nature immunology 20 (7), 915-927, 2019 | 312 | 2019 |
Notch signalling drives synovial fibroblast identity and arthritis pathology K Wei, I Korsunsky, JL Marshall, A Gao, GFM Watts, T Major, AP Croft, ... Nature 582 (7811), 259-264, 2020 | 306 | 2020 |
IFN-γ and TNF-α drive a CXCL10+ CCL2+ macrophage phenotype expanded in severe COVID-19 lungs and inflammatory diseases with tissue inflammation F Zhang, JR Mears, L Shakib, JI Beynor, S Shanaj, I Korsunsky, A Nathan, ... Genome Medicine 13, 1-17, 2021 | 165* | 2021 |
HBEGF+ macrophages in rheumatoid arthritis induce fibroblast invasiveness D Kuo, J Ding, IS Cohn, F Zhang, K Wei, DA Rao, C Rozo, UK Sokhi, ... Science translational medicine 11 (491), eaau8587, 2019 | 162 | 2019 |
Single-cell transcriptomics in cancer: computational challenges and opportunities J Fan, K Slowikowski, F Zhang Experimental & Molecular Medicine 52 (9), 1452-1465, 2020 | 146 | 2020 |
RNA identification of PRIME cells predicting rheumatoid arthritis flares DE Orange, V Yao, K Sawicka, J Fak, MO Frank, S Parveen, NE Blachere, ... New England Journal of Medicine 383 (3), 218-228, 2020 | 142 | 2020 |
Efficient and precise single-cell reference atlas mapping with Symphony JB Kang, A Nathan, K Weinand, F Zhang, N Millard, L Rumker, DB Moody, ... Nature communications 12 (1), 5890, 2021 | 122 | 2021 |
Methods for high-dimensional analysis of cells dissociated from cryopreserved synovial tissue LT Donlin, DA Rao, K Wei, K Slowikowski, MJ McGeachy, JD Turner, ... Arthritis research & therapy 20, 1-15, 2018 | 98 | 2018 |
Granzyme K+ CD8 T cells form a core population in inflamed human tissue AH Jonsson, F Zhang, G Dunlap, E Gomez-Rivas, GFM Watts, HJ Faust, ... Science translational medicine 14 (649), eabo0686, 2022 | 88 | 2022 |
FcγR engagement reprograms neutrophils into antigen cross-presenting cells that elicit acquired anti-tumor immunity V Mysore, X Cullere, J Mears, F Rosetti, K Okubo, PX Liew, F Zhang, ... Nature communications 12 (1), 4791, 2021 | 65 | 2021 |
Prediction of drought-resistant genes in Arabidopsis thaliana using SVM-RFE Y Liang, F Zhang, J Wang, T Joshi, Y Wang, D Xu PLoS one 6 (7), e21750, 2011 | 57 | 2011 |
Deconstruction of rheumatoid arthritis synovium defines inflammatory subtypes F Zhang, AH Jonsson, A Nathan, N Millard, M Curtis, Q Xiao, ... Nature 623 (7987), 616-624, 2023 | 52* | 2023 |
Urine proteomics and renal single‐cell transcriptomics implicate interleukin‐16 in lupus nephritis A Fava, DA Rao, C Mohan, T Zhang, A Rosenberg, P Fenaroli, ... Arthritis & Rheumatology 74 (5), 829-839, 2022 | 49 | 2022 |
Bioelectric signal detrending using smoothness prior approach F Zhang, S Chen, H Zhang, X Zhang, G Li Medical engineering & physics 36 (8), 1007-1013, 2014 | 26 | 2014 |
Accelerating Medicines Partnership in SLE network A Arazi, DA Rao, CC Berthier, A Davidson, Y Liu, PJ Hoover, A Chicoine, ... The immune cell landscape in kidneys of patients with lupus nephritis. Nat …, 2019 | 22 | 2019 |
Dynamic spectrum of ectopic lymphoid B cell activation and hypermutation in the RA synovium characterized by NR4A nuclear receptor expression N Meednu, J Rangel-Moreno, F Zhang, K Escalera-Rivera, E Corsiero, ... Cell reports 39 (5), 2022 | 20 | 2022 |
Reduction of the effect of arm position variation on real-time performance of motion classification Y Geng, F Zhang, L Yang, Y Zhang, G Li 2012 Annual International Conference of the IEEE Engineering in Medicine and …, 2012 | 18 | 2012 |