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Yoko Chiba
Yoko Chiba
RIKEN CSRS Biofunctional Catalyst Research Team
Verified email at jamstec.go.jp - Homepage
Title
Cited by
Cited by
Year
Discovery of PPi-type phosphoenolpyruvate carboxykinase genes in eukaryotes and bacteria
Y Chiba, R Kamikawa, K Nakada-Tsukui, Y Saito-Nakano, T Nozaki
Journal of Biological Chemistry 290 (39), 23960-23970, 2015
432015
Discovery and analysis of cofactor-dependent phosphoglycerate mutase homologs as novel phosphoserine phosphatases in Hydrogenobacter thermophilus
Y Chiba, K Oshima, H Arai, M Ishii, Y Igarashi
Journal of Biological Chemistry 287 (15), 11934-11941, 2012
382012
Proteomic analysis of Entamoeba histolytica in vivo assembled pre-mRNA splicing complexes
J Valdés, T Nozaki, E Sato, Y Chiba, K Nakada-Tsukui, ...
Journal of proteomics 111, 30-45, 2014
262014
Mechanism for folate]independent aldolase reaction catalyzed by serine hydroxymethyltransferase
Y Chiba, T Terada, M Kameya, K Shimizu, H Arai, M Ishii, Y Igarashi
The FEBS Journal 279 (3), 504-514, 2012
262012
Structural units important for activity of a novel-type phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 revealed by crystal structure analysis
Y Chiba, S Horita, J Ohtsuka, H Arai, K Nagata, Y Igarashi, M Tanokura, ...
Journal of Biological Chemistry 288 (16), 11448-11458, 2013
202013
Isolation of a bacterium possessing a haloacid dehalogenase from a marine sediment core
Y Chiba, T Yoshida, N Ito, H Nishimura, C Imada, H Yasuda, Y Sako
Microbes and environments 24 (3), 276-279, 2009
192009
Phosphoserine phosphatase is required for serine and one-carbon unit synthesis in Hydrogenobacter thermophilus
K Kim, Y Chiba, A Kobayashi, H Arai, M Ishii
Journal of bacteriology 199 (21), 10.1128/jb. 00409-17, 2017
132017
Structural comparisons of phosphoenolpyruvate carboxykinases reveal the evolutionary trajectories of these phosphodiester energy conversion enzymes
Y Chiba, T Miyakawa, Y Shimane, K Takai, M Tanokura, T Nozaki
Journal of Biological Chemistry 294 (50), 19269-19278, 2019
122019
Phylogenetic position of Aquificales based on the whole genome sequences of six Aquificales species
K Oshima, Y Chiba, Y Igarashi, H Arai, M Ishii
International Journal of Evolutionary Biology 2012 (1), 859264, 2012
112012
Discovery and analysis of a novel type of the serine biosynthetic enzyme phosphoserine phosphatase in Thermus thermophilus
Y Chiba, A Yoshida, S Shimamura, M Kameya, T Tomita, M Nishiyama, ...
The FEBS Journal 286 (4), 726-736, 2019
82019
Heterogeneity of the serine synthetic pathway in Entamoeba species
Y Chiba, T Makiuchi, G Jeelani, T Nozaki
Molecular and biochemical parasitology 207 (2), 56-60, 2016
82016
Thermodynamic principle to enhance enzymatic activity using the substrate affinity
H Ooka, Y Chiba, R Nakamura
Nature Communications 14 (1), 4860, 2023
62023
Discovery of an intermolecular disulfide bond required for the thermostability of a heterodimeric protein from the thermophile Hydrogenobacter thermophilus
KT Kim, Y Chiba, H Arai, M Ishii
Bioscience, biotechnology, and biochemistry 80 (2), 232-240, 2016
52016
Import of Entamoeba histolytica Mitosomal ATP Sulfurylase Relies on Internal Targeting Sequences
HJ Santos, Y Chiba, T Makiuchi, S Arakawa, Y Murakami, K Tomii, K Imai, ...
Microorganisms 8 (8), 1229, 2020
22020
Fragmentation of acetate-CoA ligase gives a clue to understand domain rearrangement history of NDP-forming acyl-CoA synthetase superfamily proteins
Y Chiba, M Shitara, K Takai
Bioscience, Biotechnology, and Biochemistry 84 (10), 2045-2053, 2020
12020
Crystallization and preliminary X-ray diffraction analysis of a novel type of phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6
Y Chiba, S Horita, J Ohtsuka, H Arai, K Nagata, Y Igarashi, M Tanokura, ...
Acta Crystallographica Section F: Structural Biology and Crystallization c, 2012
12012
Rationalizing the Influence of the Binding Affinity on the Activity of Phosphoserine Phosphatases
Y Chiba, H Ooka, ME Wintzer, N Tsunematsu, T Nogawa, T Suzuki, ...
Angewandte Chemie, e202318635, 2024
2024
Universal Design Principle to Enhance Enzymatic Activity using the Substrate Affinity
H Ooka, Y Chiba, R Nakamura
bioRxiv, 2023.02. 01.526728, 2023
2023
Diverse Phosphoserine Phosphatases Exhibit Maximum Activity at an Intermediate Binding Affinity in Accord with the Sabatier Principle of Catalysis
Y Chiba, H Ooka, M Wintzer, N Tsunematsu, T Suzuki, N Dohmae, ...
bioRxiv, 2023.03. 10.532031, 2023
2023
Characterization of a Non]Classic Type Phosphoserine Phosphatase Homolog in Thermodesulfidibacter takaii, a Thermophilic, Autotrophic Bacterium in the c
M Wintzer, R Nakamura, Y Chiba
The FASEB Journal 35, 2021
2021
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Articles 1–20