Discovery of PPi-type phosphoenolpyruvate carboxykinase genes in eukaryotes and bacteria Y Chiba, R Kamikawa, K Nakada-Tsukui, Y Saito-Nakano, T Nozaki Journal of Biological Chemistry 290 (39), 23960-23970, 2015 | 45 | 2015 |
Discovery and analysis of cofactor-dependent phosphoglycerate mutase homologs as novel phosphoserine phosphatases in Hydrogenobacter thermophilus Y Chiba, K Oshima, H Arai, M Ishii, Y Igarashi Journal of Biological Chemistry 287 (15), 11934-11941, 2012 | 37 | 2012 |
Mechanism for folate‐independent aldolase reaction catalyzed by serine hydroxymethyltransferase Y Chiba, T Terada, M Kameya, K Shimizu, H Arai, M Ishii, Y Igarashi The FEBS Journal 279 (3), 504-514, 2012 | 28 | 2012 |
Proteomic analysis of Entamoeba histolytica in vivo assembled pre-mRNA splicing complexes J Valdés, T Nozaki, E Sato, Y Chiba, K Nakada-Tsukui, ... Journal of proteomics 111, 30-45, 2014 | 27 | 2014 |
Isolation of a bacterium possessing a haloacid dehalogenase from a marine sediment core Y Chiba, T Yoshida, N Ito, H Nishimura, C Imada, H Yasuda, Y Sako Microbes and environments 24 (3), 276-279, 2009 | 22 | 2009 |
Structural units important for activity of a novel-type phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 revealed by crystal structure analysis Y Chiba, S Horita, J Ohtsuka, H Arai, K Nagata, Y Igarashi, M Tanokura, ... Journal of Biological Chemistry 288 (16), 11448-11458, 2013 | 21 | 2013 |
Phosphoserine phosphatase is required for serine and one-carbon unit synthesis in Hydrogenobacter thermophilus K Kim, Y Chiba, A Kobayashi, H Arai, M Ishii Journal of bacteriology 199 (21), 10.1128/jb. 00409-17, 2017 | 13 | 2017 |
Structural comparisons of phosphoenolpyruvate carboxykinases reveal the evolutionary trajectories of these phosphodiester energy conversion enzymes Y Chiba, T Miyakawa, Y Shimane, K Takai, M Tanokura, T Nozaki Journal of Biological Chemistry 294 (50), 19269-19278, 2019 | 12 | 2019 |
Thermodynamic principle to enhance enzymatic activity using the substrate affinity H Ooka, Y Chiba, R Nakamura Nature Communications 14 (1), 4860, 2023 | 11 | 2023 |
Phylogenetic position of Aquificales based on the whole genome sequences of six Aquificales species K Oshima, Y Chiba, Y Igarashi, H Arai, M Ishii International Journal of Evolutionary Biology 2012 (1), 859264, 2012 | 11 | 2012 |
Heterogeneity of the serine synthetic pathway in Entamoeba species Y Chiba, T Makiuchi, G Jeelani, T Nozaki Molecular and biochemical parasitology 207 (2), 56-60, 2016 | 9 | 2016 |
Discovery and analysis of a novel type of the serine biosynthetic enzyme phosphoserine phosphatase in Thermus thermophilus Y Chiba, A Yoshida, S Shimamura, M Kameya, T Tomita, M Nishiyama, ... The FEBS Journal 286 (4), 726-736, 2019 | 8 | 2019 |
Discovery of an intermolecular disulfide bond required for the thermostability of a heterodimeric protein from the thermophile Hydrogenobacter thermophilus KT Kim, Y Chiba, H Arai, M Ishii Bioscience, biotechnology, and biochemistry 80 (2), 232-240, 2016 | 5 | 2016 |
Fragmentation of acetate-CoA ligase gives a clue to understand domain rearrangement history of NDP-forming acyl-CoA synthetase superfamily proteins Y Chiba, M Shitara, K Takai Bioscience, Biotechnology, and Biochemistry 84 (10), 2045-2053, 2020 | 2 | 2020 |
Import of Entamoeba histolytica Mitosomal ATP Sulfurylase Relies on Internal Targeting Sequences HJ Santos, Y Chiba, T Makiuchi, S Arakawa, Y Murakami, K Tomii, K Imai, ... Microorganisms 8 (8), 1229, 2020 | 2 | 2020 |
Rationalizing the Influence of the Binding Affinity on the Activity of Phosphoserine Phosphatases Y Chiba, H Ooka, ME Wintzer, N Tsunematsu, T Nogawa, T Suzuki, ... Angewandte Chemie International Edition 63 (13), e202318635, 2024 | 1 | 2024 |
Universal Design Principle to Enhance Enzymatic Activity using the Substrate Affinity H Ooka, Y Chiba, R Nakamura bioRxiv, 2023.02. 01.526728, 2023 | 1 | 2023 |
Crystallization and preliminary X-ray diffraction analysis of a novel type of phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6 Y Chiba, S Horita, J Ohtsuka, H Arai, K Nagata, Y Igarashi, M Tanokura, ... Acta Crystallographica Section F: Structural Biology and Crystallization …, 2012 | 1 | 2012 |
Diverse Phosphoserine Phosphatases Exhibit Maximum Activity at an Intermediate Binding Affinity in Accord with the Sabatier Principle of Catalysis Y Chiba, H Ooka, M Wintzer, N Tsunematsu, T Suzuki, N Dohmae, ... bioRxiv, 2023.03. 10.532031, 2023 | | 2023 |
Characterization of a Non‐Classic Type Phosphoserine Phosphatase Homolog in Thermodesulfidibacter takaii, a Thermophilic, Autotrophic Bacterium in the … M Wintzer, R Nakamura, Y Chiba The FASEB Journal 35, 2021 | | 2021 |