Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas Cancer Genome Atlas Research Network New England Journal of Medicine 372 (26), 2481-2498, 2015 | 2255 | 2015 |
Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ... Cell 164 (3), 550-563, 2016 | 1513 | 2016 |
Comprehensive and integrated genomic characterization of adult soft tissue sarcomas AJ Lazar, MD McLellan, MH Bailey, CA Miller, EL Appelbaum, MG Cordes, ... Cell 171 (4), 950-965, 2017 | 554 | 2017 |
Predicting cancer outcomes from histology and genomics using convolutional networks P Mobadersany, S Yousefi, M Amgad, DA Gutman, JS Barnholtz-Sloan, ... Proceedings of the National Academy of Sciences 115 (13), E2970-E2979, 2018 | 533 | 2018 |
MR imaging predictors of molecular profile and survival: multi-institutional study of the TCGA glioblastoma data set DA Gutman, LAD Cooper, SN Hwang, CA Holder, JJ Gao, TD Aurora, ... Radiology 267 (2), 560, 2013 | 390 | 2013 |
The tumor microenvironment strongly impacts master transcriptional regulators and gene expression class of glioblastoma LAD Cooper, DA Gutman, C Chisolm, C Appin, J Kong, Y Rong, T Kurc, ... The American journal of pathology 180 (5), 2108-2119, 2012 | 203 | 2012 |
T2–FLAIR Mismatch, an Imaging Biomarker for IDH and 1p/19q Status in Lower-grade Gliomas: A TCGA/TCIA ProjectT2–FLAIR Mismatch Predicts Low-Grade Glioma Molecular Class SH Patel, LM Poisson, DJ Brat, Y Zhou, L Cooper, M Snuderl, C Thomas, ... Clinical cancer research 23 (20), 6078-6085, 2017 | 198 | 2017 |
Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization P Khosravi, E Kazemi, Q Zhan, JE Malmsten, M Toschi, P Zisimopoulos, ... NPJ digital medicine 2 (1), 1-9, 2019 | 174 | 2019 |
Tumor-Infiltrating Lymphocytes in Glioblastoma Are Associated with Specific Genomic Alterations and Related to Transcriptional ClassTumor-Infiltrating Lymphocytes in Glioblastoma WC Rutledge, J Kong, J Gao, DA Gutman, LAD Cooper, C Appin, Y Park, ... Clinical Cancer Research 19 (18), 4951-4960, 2013 | 163 | 2013 |
Predicting clinical outcomes from large scale cancer genomic profiles with deep survival models S Yousefi, F Amrollahi, M Amgad, C Dong, JE Lewis, C Song, DA Gutman, ... Scientific reports 7 (1), 1-11, 2017 | 154 | 2017 |
The proneural molecular signature is enriched in oligodendrogliomas and predicts improved survival among diffuse gliomas LAD Cooper, DA Gutman, Q Long, BA Johnson, SR Cholleti, T Kurc, ... PloS one 5 (9), e12548, 2010 | 153 | 2010 |
The OncoPPi network of cancer-focused protein–protein interactions to inform biological insights and therapeutic strategies Z Li, AA Ivanov, R Su, V Gonzalez-Pecchi, Q Qi, S Liu, P Webber, ... Nature communications 8 (1), 1-14, 2017 | 146 | 2017 |
Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data DA Gutman, J Cobb, D Somanna, Y Park, F Wang, T Kurc, JH Saltz, ... Journal of the American Medical Informatics Association 20 (6), 1091-1098, 2013 | 142 | 2013 |
PanCancer insights from The Cancer Genome Atlas: the pathologist's perspective LAD Cooper, EG Demicco, JH Saltz, RT Powell, A Rao, AJ Lazar The Journal of pathology 244 (5), 512-524, 2018 | 114 | 2018 |
Integrated morphologic analysis for the identification and characterization of disease subtypes LAD Cooper, J Kong, DA Gutman, F Wang, J Gao, C Appin, S Cholleti, ... Journal of the American Medical Informatics Association 19 (2), 317-323, 2012 | 109 | 2012 |
Machine-based morphologic analysis of glioblastoma using whole-slide pathology images uncovers clinically relevant molecular correlates J Kong, LAD Cooper, F Wang, J Gao, G Teodoro, L Scarpace, ... PloS one 8 (11), e81049, 2013 | 106 | 2013 |
The digital slide archive: A software platform for management, integration, and analysis of histology for cancer research DA Gutman, M Khalilia, S Lee, M Nalisnik, Z Mullen, J Beezley, ... Cancer research 77 (21), e75-e78, 2017 | 98 | 2017 |
Ergonomics of wearable computers C Baber, J Knight, D Haniff, L Cooper Mobile Networks and Applications 4 (1), 15-21, 1999 | 94 | 1999 |
Somatic mutations associated with MRI-derived volumetric features in glioblastoma DA Gutman, WD Dunn, P Grossmann, LAD Cooper, CA Holder, KL Ligon, ... Neuroradiology 57 (12), 1227-1237, 2015 | 92 | 2015 |
Image-guided genomics of phenotypically heterogeneous populations reveals vascular signalling during symbiotic collective cancer invasion J Konen, E Summerbell, B Dwivedi, K Galior, Y Hou, L Rusnak, A Chen, ... Nature communications 8 (1), 1-15, 2017 | 87 | 2017 |