| Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica DW Udwary, L Zeigler, RN Asolkar, V Singan, A Lapidus, W Fenical, ... Proceedings of the National Academy of Sciences 104 (25), 10376-10381, 2007 | 654 | 2007 |
| Immunofluorescence and fluorescent-protein tagging show high correlation for protein localization in mammalian cells C Stadler, E Rexhepaj, VR Singan, RF Murphy, R Pepperkok, M Uhlén, ... Nature methods 10 (4), 315-323, 2013 | 272 | 2013 |
| Genome-wide RNAi screening identifies human proteins with a regulatory function in the early secretory pathway JC Simpson, B Joggerst, V Laketa, F Verissimo, C Cetin, H Erfle, ... Nature cell biology 14 (7), 764-774, 2012 | 220 | 2012 |
| Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics C Gao, L Montoya, L Xu, M Madera, J Hollingsworth, E Purdom, V Singan, ... Nature Communications 11 (1), 34, 2020 | 203 | 2020 |
| wFleaBase: the Daphnia genome database JK Colbourne, VR Singan, DG Gilbert BMC bioinformatics 6, 1-5, 2005 | 168 | 2005 |
| Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass JT Lovell, AH MacQueen, S Mamidi, J Bonnette, J Jenkins, JD Napier, ... Nature 590 (7846), 438-444, 2021 | 154 | 2021 |
| Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses N Varoquaux, B Cole, C Gao, G Pierroz, CR Baker, D Patel, M Madera, ... Proceedings of the National Academy of Sciences 116 (52), 27124-27132, 2019 | 144 | 2019 |
| Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas V Fochi, W Chitarra, A Kohler, S Voyron, VR Singan, EA Lindquist, ... New Phytologist 213 (1), 365-379, 2017 | 141 | 2017 |
| Transgenic expression of the dicotyledonous pattern recognition receptor EFR in rice leads to ligand-dependent activation of defense responses B Schwessinger, O Bahar, N Thomas, N Holton, V Nekrasov, D Ruan, ... PLoS pathogens 11 (3), e1004809, 2015 | 124 | 2015 |
| Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT 2 in caffeoylquinic acid biosynthesis and its regulation by defense … J Zhang, Y Yang, K Zheng, M Xie, K Feng, SS Jawdy, LE Gunter, ... New Phytologist 220 (2), 502-516, 2018 | 113 | 2018 |
| Insights of biomass recalcitrance in natural Populus trichocarpa variants for biomass conversion CG Yoo, Y Yang, Y Pu, X Meng, W Muchero, KL Yee, OA Thompson, ... Green Chemistry 19 (22), 5467-5478, 2017 | 92 | 2017 |
| Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities C Gao, L Xu, L Montoya, M Madera, J Hollingsworth, L Chen, E Purdom, ... Nature communications 13 (1), 3867, 2022 | 83 | 2022 |
| Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant–cyanobacteria symbiosis D Warshan, JL Espinoza, RK Stuart, RA Richter, SY Kim, N Shapiro, ... The ISME journal 11 (12), 2821-2833, 2017 | 76 | 2017 |
| Genome-scale metabolic rewiring improves titers rates and yields of the non-native product indigoidine at scale D Banerjee, T Eng, AK Lau, Y Sasaki, B Wang, Y Chen, JP Prahl, ... Nature communications 11 (1), 5385, 2020 | 73 | 2020 |
| Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant–pathogen interactions in a tree W Muchero, KL Sondreli, JG Chen, BR Urbanowicz, J Zhang, V Singan, ... Proceedings of the National Academy of Sciences 115 (45), 11573-11578, 2018 | 73 | 2018 |
| The ectomycorrhizal fungus Pisolithus microcarpus encodes a microRNA involved in cross-kingdom gene silencing during symbiosis J Wong-Bajracharya, VR Singan, R Monti, KL Plett, V Ng, IV Grigoriev, ... Proceedings of the National Academy of Sciences 119 (3), e2103527119, 2022 | 67 | 2022 |
| Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors SP Gordon, B Contreras-Moreira, JJ Levy, A Djamei, A Czedik-Eysenberg, ... Nature Communications 11 (1), 3670, 2020 | 67 | 2020 |
| The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus VW Wu, N Thieme, LB Huberman, A Dietschmann, DJ Kowbel, J Lee, ... Proceedings of the National Academy of Sciences 117 (11), 6003-6013, 2020 | 64 | 2020 |
| A 5-Enolpyruvylshikimate 3-Phosphate Synthase Functions as a Transcriptional Repressor in Populus M Xie, W Muchero, AC Bryan, K Yee, HB Guo, J Zhang, TJ Tschaplinski, ... The Plant Cell 30 (7), 1645-1660, 2018 | 60 | 2018 |
| A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism Y Xiong, VW Wu, A Lubbe, L Qin, S Deng, M Kennedy, D Bauer, ... PLoS genetics 13 (5), e1006737, 2017 | 56 | 2017 |
Jeremy C. SimpsonFull Professor of Cell Biology, UCD, Dublin, IrelandVerified email at ucd.ie
