Jeremy D. DeBarry
Title
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Cited by
Year
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
Y Wang, H Tang, JD DeBarry, X Tan, J Li, X Wang, T Lee, H Jin, B Marler, ...
Nucleic acids research 40 (7), e49-e49, 2012
13532012
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants
JA Banks, T Nishiyama, M Hasebe, JL Bowman, M Gribskov, ...
science 332 (6032), 960-963, 2011
6752011
De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)
EK Al-Dous, B George, ME Al-Mahmoud, MY Al-Jaber, H Wang, ...
Nature biotechnology 29 (6), 521, 2011
3422011
Sequence analysis of bacterial artificial chromosome clones from the apospory-specific genomic region of Pennisetum and Cenchrus
JA Conner, S Goel, G Gunawan, MM Cordonnier-Pratt, VE Johnson, ...
Plant physiology 147 (3), 1396-1411, 2008
912008
Applied genomics: data mining reveals species-specific malaria diagnostic targets more sensitive than 18S rRNA
A Demas, J Oberstaller, J DeBarry, NW Lucchi, G Srinivasamoorthy, ...
Journal of clinical microbiology 49 (7), 2411-2418, 2011
762011
Theileria parasites secrete a prolyl isomerase to maintain host leukocyte transformation
J Marsolier, M Perichon, JD DeBarry, BO Villoutreix, J Chluba, T Lopez, ...
Nature 520 (7547), 378-382, 2015
752015
Real-time loop-mediated isothermal amplification (RealAmp) for the species-specific identification of Plasmodium vivax
JC Patel, J Oberstaller, M Xayavong, J Narayanan, JD DeBarry, ...
PloS one 8 (1), e54986, 2013
752013
The dynamics of LTR retrotransposon accumulation across 25 million years of panicoid grass evolution
MC Estep, JD DeBarry, JL Bennetzen
Heredity 110 (2), 194-204, 2013
682013
Jumbled genomes: missing Apicomplexan synteny
JD DeBarry, JC Kissinger
Molecular biology and evolution 28 (10), 2855-2871, 2011
602011
A new single-step PCR assay for the detection of the zoonotic malaria parasite Plasmodium knowlesi
NW Lucchi, M Poorak, J Oberstaller, J DeBarry, G Srinivasamoorthy, ...
PLoS One 7 (2), e31848, 2012
572012
The Genome of Haemoproteus tartakovskyi and Its Relationship to Human Malaria Parasites
S Bensch, B Canbńck, JD DeBarry, T Johansson, O Hellgren, ...
Genome Biology and Evolution 8 (5), 1361-1373, 2016
502016
SynView: a GBrowse-compatible approach to visualizing comparative genome data
H Wang, JD DeBarry, JC Kissinger
A Practical Guide to Bioinformatics Analysis, 99-111, 2010
44*2010
Genome cartography: charting the apicomplexan genome
JC Kissinger, J DeBarry
Trends in parasitology 27 (8), 345-354, 2011
362011
The Contribution of LTR Retrotransposon Sequences to Gene Evolution in Mus musculus
JD DeBarry, EW Ganko, EM McCarthy, JF McDonald
Molecular biology and evolution 23 (3), 479-481, 2006
352006
Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm
JD DeBarry, R Liu, JL Bennetzen
BMC bioinformatics 9 (1), 1-11, 2008
322008
Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study
KJ Lee, W Yin, D Arafat, Y Tang, K Uppal, VL Tran, M Cabrera-Mora, ...
Frontiers in cell and developmental biology 2, 54, 2014
152014
Distinct amino acid and lipid perturbations characterize acute versus chronic malaria
RJ Cordy, R Patrapuvich, LN Lili, M Cabrera-Mora, JT Chien, GK Tharp, ...
JCI insight 4 (9), 2019
132019
Assembly of highly repetitive genomes using short reads: the genome of discrete typing unit III Trypanosoma cruzi strain 231
RP Baptista, JL Reis-Cunha, JD DeBarry, E Chiari, JC Kissinger, ...
Microbial genomics 4 (4), 2018
132018
PacBio assembly of a Plasmodium knowlesi genome sequence with Hi-C correction and manual annotation of the SICAvar gene family
SA Lapp, JA Geraldo, JT Chien, F Ay, SB Pakala, G Batugedara, ...
Parasitology 145 (1), 71-84, 2018
132018
Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques
Y Tang, CJ Joyner, M Cabrera-Mora, CL Saney, SA Lapp, MV Nural, ...
Malaria journal 16 (1), 1-16, 2017
102017
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Articles 1–20