Andrew Kern
Andrew Kern
Evergreen Associate Professor of Biology, University of Oregon
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A map of human genome variation from population-scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
The variant call format and VCFtools
P Danecek, A Auton, G Abecasis, CA Albers, E Banks, MA DePristo, ...
Bioinformatics 27 (15), 2156-2158, 2011
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
nature 447 (7146), 799, 2007
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
science 316 (5822), 222-234, 2007
Mapping copy number variation by population-scale genome sequencing
RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, ...
Nature 470 (7332), 59-65, 2011
An RNA gene expressed during cortical development evolved rapidly in humans
KS Pollard, SR Salama, N Lambert, MA Lambot, S Coppens, JS Pedersen, ...
Nature 443 (7108), 167-172, 2006
Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans
DJ Begun, AK Holloway, K Stevens, LDW Hillier, YP Poh, MW Hahn, ...
PLoS Biol 5 (11), e310, 2007
Diversity of human copy number variation and multicopy genes
PH Sudmant, JO Kitzman, F Antonacci, C Alkan, M Malig, A Tsalenko, ...
Science 330 (6004), 641-646, 2010
Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks
MW Hahn, AD Kern
Molecular biology and evolution 22 (4), 803-806, 2005
Variation in genome-wide mutation rates within and between human families
DF Conrad, JEM Keebler, MA DePristo, SJ Lindsay, Y Zhang, F Casals, ...
Nature genetics 43 (7), 712, 2011
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011
Forces shaping the fastest evolving regions in the human genome
KS Pollard, SR Salama, B King, AD Kern, T Dreszer, S Katzman, A Siepel, ...
PLoS Genet 2 (10), e168, 2006
Genomic variation in natural populations of Drosophila melanogaster
CH Langley, K Stevens, C Cardeno, YCG Lee, DR Schrider, JE Pool, ...
Genetics 192 (2), 533-598, 2012
Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression
MT Levine, CD Jones, AD Kern, HA Lindfors, DJ Begun
Proceedings of the National Academy of Sciences 103 (26), 9935-9939, 2006
Human genome ultraconserved elements are ultraselected
S Katzman, AD Kern, G Bejerano, G Fewell, L Fulton, RK Wilson, ...
Science 317 (5840), 915-915, 2007
The functional spectrum of low-frequency coding variation
GT Marth, F Yu, AR Indap, K Garimella, S Gravel, WF Leong, ...
Genome biology 12 (9), R84, 2011
Genomic differentiation between temperate and tropical Australian populations of Drosophila melanogaster
B Kolaczkowski, AD Kern, AK Holloway, DJ Begun
Genetics 187 (1), 245-260, 2011
The 1000 Genomes Project: data management and community access
L Clarke, X Zheng-Bradley, R Smith, E Kulesha, C Xiao, I Toneva, ...
Nature methods 9 (5), 459-462, 2012
Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba/Drosophila erecta clade
DJ Begun, HA Lindfors, AD Kern, CD Jones
Genetics 176 (2), 1131-1137, 2007
Evolutionary and biomedical insights from the rhesus macaque genome.
MGS Rhesus, RA Gibbs, J Rogers, MG Katze, R Bumgarner, ...
Science (New York, NY) 316 (5822), 222, 2007
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