Follow
Tina Toni
Title
Cited by
Cited by
Year
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
T Toni, D Welch, N Strelkowa, A Ipsen, MPH Stumpf
Journal of the Royal Society Interface 6 (31), 187-202, 2009
18432009
Simulation-based model selection for dynamical systems in systems and population biology
T Toni, MPH Stumpf
Bioinformatics 26 (1), 104-110, 2010
3412010
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
J Liepe, P Kirk, S Filippi, T Toni, CP Barnes, MPH Stumpf
Nature protocols 9 (2), 439-456, 2014
2682014
Managing membrane stress: the phage shock protein (Psp) response, from molecular mechanisms to physiology
N Joly, C Engl, G Jovanovic, M Huvet, T Toni, X Sheng, MPH Stumpf, ...
FEMS microbiology reviews 34 (5), 797-827, 2010
2552010
ABC-SysBio—approximate Bayesian computation in Python with GPU support
J Liepe, C Barnes, E Cule, K Erguler, P Kirk, T Toni, MPH Stumpf
Bioinformatics 26 (14), 1797-1799, 2010
1832010
Model selection in systems biology depends on experimental design
D Silk, PDW Kirk, CP Barnes, T Toni, MPH Stumpf
PLoS computational biology 10 (6), e1003650, 2014
742014
The evolution of the phage shock protein response system: interplay between protein function, genomic organization, and system function
M Huvet, T Toni, X Sheng, T Thorne, G Jovanovic, C Engl, M Buck, ...
Molecular biology and evolution 28 (3), 1141-1155, 2011
742011
Combined model of intrinsic and extrinsic variability for computational network design with application to synthetic biology
T Toni, B Tidor
PLoS computational biology 9 (3), e1002960, 2013
672013
The alzheimer's disease prediction of longitudinal evolution (TADPOLE) challenge: Results after 1 year follow-up
RV Marinescu, NP Oxtoby, AL Young, EE Bron, AW Toga, MW Weiner, ...
arXiv preprint arXiv:2002.03419, 2020
592020
The ABC of reverse engineering biological signalling systems
M Secrier, T Toni, MPH Stumpf
Molecular BioSystems 5 (12), 1925-1935, 2009
592009
Parameter inference for biochemical systems that undergo a Hopf bifurcation
PDW Kirk, T Toni, MPH Stumpf
Biophysical journal 95 (2), 540-549, 2008
372008
Designing attractive models via automated identification of chaotic and oscillatory dynamical regimes
D Silk, PDW Kirk, CP Barnes, T Toni, A Rose, S Moon, MJ Dallman, ...
Nature communications 2 (1), 489, 2011
352011
Elucidating the in vivo phosphorylation dynamics of the ERK MAP kinase using quantitative proteomics data and Bayesian model selection
T Toni, Y Ozaki, P Kirk, S Kuroda, MPH Stumpf
Molecular BioSystems 8 (7), 1921-1929, 2012
332012
Systems pharmacology of the NGF signaling through p75 and TrkA receptors
T Toni, P Dua, PH Van Der Graaf
CPT: pharmacometrics & systems pharmacology 3 (12), 1-8, 2014
262014
From qualitative data to quantitative models: analysis of the phage shock protein stress response in Escherichia coli
T Toni, G Jovanovic, M Huvet, M Buck, MPH Stumpf
BMC systems biology 5, 1-16, 2011
262011
Parameter inference and model selection in signaling pathway models
T Toni, MPH Stumpf
Computational Biology, 283-295, 2010
232010
Model-based evolutionary analysis: the natural history of phage-shock stress response
M Huvet, T Toni, H Tan, G Jovanovic, C Engl, M Buck, MPH Stumpf
Biochemical Society Transactions 37 (4), 762-767, 2009
182009
Tutorial on ABC rejection and ABC SMC for parameter estimation and model selection
T Toni, MPH Stumpf
arXiv preprint arXiv:0910.4472, 2009
132009
Approximate Bayesian computation for parameter inference and model selection in systems biology
T Toni
Imperial College London, 2010
92010
ABC SMC for parameter estimation and model selection with applications in systems biology
T Toni
Nature Precedings, 1-1, 2011
32011
The system can't perform the operation now. Try again later.
Articles 1–20