| Algorithm for optimized mRNA design improves stability and immunogenicity H Zhang, L Zhang, A Lin, C Xu, Z Li, K Liu, B Liu, X Ma, F Zhao, H Jiang, ... Nature 621 (7978), 396-403, 2023 | 90* | 2023 |
| LinearPartition: linear-time approximation of RNA folding partition function and base-pairing probabilities H Zhang, L Zhang, DH Mathews, L Huang Bioinformatics 36 (Supplement_1), i258-i267, 2020 | 56 | 2020 |
| Analysis and visualization of spatial transcriptomic data B Liu, Y Li, L Zhang Frontiers in Genetics 12, 785290, 2022 | 35 | 2022 |
| CoV-Seq, a new tool for SARS-CoV-2 genome analysis and visualization: Development and usability study B Liu, K Liu, H Zhang, L Zhang, Y Bian, L Huang Journal of medical Internet research 22 (10), e22299, 2020 | 31* | 2020 |
| LinearTurboFold: linear-time global prediction of conserved structures for RNA homologs with applications to SARS-CoV-2 S Li, H Zhang, L Zhang, K Liu, B Liu, DH Mathews, L Huang Proceedings of the National Academy of Sciences 118 (52), e2116269118, 2021 | 19 | 2021 |
| ThreshKnot: Thresholded ProbKnot for improved RNA secondary structure prediction L Zhang, H Zhang, DH Mathews, L Huang arXiv preprint arXiv:1912.12796, 2019 | 14 | 2019 |
| LazySampling and LinearSampling: fast stochastic sampling of RNA secondary structure with applications to SARS-CoV-2 H Zhang, S Li, L Zhang, DH Mathews, L Huang Nucleic acids research 51 (2), e7-e7, 2023 | 8* | 2023 |
| Linear-time algorithms for RNA structure prediction H Zhang, L Zhang, K Liu, S Li, DH Mathews, L Huang RNA Structure Prediction, 15-34, 2022 | 3 | 2022 |
| Herpes zoster mRNA vaccine induces superior vaccine immunity over licensed vaccine in mice and rhesus macaques L Huang, T Zhao, W Zhao, A Shao, H Zhao, W Ma, Y Gong, X Zeng, ... Emerging Microbes & Infections, 2309985, 2024 | 2 | 2024 |
| LinearCoFold and LinearCoPartition: linear-time algorithms for secondary structure prediction of interacting RNA molecules H Zhang, S Li, N Dai, L Zhang, DH Mathews, L Huang Nucleic Acids Research 51 (18), e94-e94, 2023 | 1 | 2023 |
| An HBV mRNA vaccine with favorable virological suppression and superior immunity H Zhao, Y Yu, Z Liu, L Huang, A Yang, L Jiao, Z Song, Y Wang, C Bao, ... bioRxiv, 2022.11. 18.517095, 2022 | 1 | 2022 |
| Linearalifold: linear-time consensus structure prediction for RNA alignments L Zhang, S Li, H Zhang, DH Mathews, L Huang arXiv preprint arXiv:2206.14794, 2022 | 1 | 2022 |
| Improving the Circularization Efficiency, Stability and Translatability of Circular RNA by circDesign C Xu, L Zhang, W Wang, Y Tang, Q Wang, J An, H Xu, Y Ge, H Zhu, ... bioRxiv, 2023.07. 09.548293, 2023 | | 2023 |
