Masahiro Kasahara
Masahiro Kasahara
Associate Professor of Computational Biology, The University of Tokyo
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The medaka draft genome and insights into vertebrate genome evolution
M Kasahara, K Naruse, S Sasaki, Y Nakatani, W Qu, B Ahsan, T Yamada, ...
Nature 447 (7145), 714-719, 2007
The Genome Sequence of Silkworm, Bombyx mori
K Mita, M Kasahara, S Sasaki, Y Nagayasu, T Yamada, H Kanamori, ...
DNA research 11 (1), 27-35, 2004
The genome of a lepidopteran model insect, the silkworm Bombyx mori
International Silkworm Genome Consortium
Insect Biochem Mol Biol 38 (12), 1036-1045, 2008
Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites
S Sasaki, CC Mello, A Shimada, Y Nakatani, S Hashimoto, M Ogawa, ...
Science 323 (5912), 401-404, 2009
Performance comparison of second-and third-generation sequencers using a bacterial genome with two chromosomes
M Miyamoto, D Motooka, K Gotoh, T Imai, K Yoshitake, N Goto, T Iida, ...
BMC genomics 15 (1), 699, 2014
Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori
Y Suetsugu, R Futahashi, H Kanamori, K Kadono-Okuda, S Sasanuma, ...
G3: Genes, Genomes, Genetics 3 (9), 1481-1492, 2013
Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory
K Fukushima, X Fang, D Alvarez-Ponce, H Cai, L Carretero-Paulet, ...
Nature Ecology & Evolution 1 (3), 1-9, 2017
UTGB/medaka: genomic resource database for medaka biology
B Ahsan, D Kobayashi, T Yamada, M Kasahara, S Sasaki, TL Saito, ...
Nucleic acids research 36 (suppl_1), D747-D752, 2007
Introducing difference recurrence relations for faster semi-global alignment of long sequences
H Suzuki, M Kasahara
BMC bioinformatics 19 (1), 33-47, 2018
Cost-effective sequencing of full-length cDNA clones powered by a de novo-reference hybrid assembly
RM Kuroshu, J Watanabe, S Sugano, S Morishita, Y Suzuki, M Kasahara
PLoS One 5 (5), e10517, 2010
Large-scale genome sequence processing
M Kasahara, S Morishita
Imperial College Press, 2006
Acceleration of nucleotide semi-global alignment with adaptive banded dynamic programming
H Suzuki, M Kasahara
BioRxiv, 130633, 2017
Long read sequencing reveals a novel class of structural aberrations in cancers: identification and characterization of cancerous local amplifications
Y Sakamoto, L Xu, M Seki, TT Yokoyama, M Kasahara, Y Kashima, ...
bioRxiv, 620047, 2019
MoMI-G: modular multi-scale integrated genome graph browser
TT Yokoyama, Y Sakamoto, M Seki, Y Suzuki, M Kasahara
BMC bioinformatics 20 (1), 1-14, 2019
Introduction to genome assembler
S Morishita, M Kasahara, S Sasaki
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 50 (16 Suppl), 2255, 2005
A Synthesis of the Molecular Phylogeny and the Comparative Genomics in Fishes
K Naruse, S Yasumasu, M Nishida, M Miya, M Kawaguchi, J Hiroi, I Iuchi, ...
Zoological Science 22 (12), 1394-1396, 2005
Draft Genome Sequence of Medaka (Orizias latipes) and Its Useful Applications (A Synthesis of the Molecular Phylogeny and the Comparative Genomics in Fishes, Symposium …
M Kasahara, S Sasaki, Y Nakatani, W Qu, A Budrul, T Yamada, ...
Zoological science 22 (12), 1395-1396, 2005
MEDAKA GENOME SEQUENCING AND THE VERTEBRATE GENOME EVOLUTION (Genetics, Abstracts of papers presented at the 76^< th> Annual Meeting of the Zoological Society of Japan)
K Naruse, Y Nakatani, W Qu, M Kasahara, S Sasaki, T Yamada, A Budrul, ...
Zoological science 22 (12), 1511-1512, 2005
Medaka Genome Sequencing and the Comparative Genomics of Fishes (Comparative Genomics of Animals, Symposium, PROCEEDING OF THE 76^< TH> ANNUAL MEETING OF THE ZOOLOGICAL SOCIETY …
K Naruse, Y Nakatani, W Qu, M Kasahara, S Sasaki, T Yamada, A Budrul, ...
Zoological science 22 (12), 1378-1379, 2005
The RNA World in Plants: Post-Transcriptional Control III
SL Harmer, JB Hogenesch, M Straume, HS Chang, B Han, T Zhu, X Wang, ...
Photochem. Photobiol 72, 273-282, 0
論文 1–20