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Roshan Sharma
Roshan Sharma
Single-cell Analytics and Innovation Lab, MSKCC
Verified email at columbia.edu
Title
Cited by
Cited by
Year
Recovering gene interactions from single-cell data using data diffusion
D Van Dijk, R Sharma, J Nainys, K Yim, P Kathail, AJ Carr, C Burdziak, ...
Cell 174 (3), 716-729. e27, 2018
13912018
The emergent landscape of the mouse gut endoderm at single-cell resolution
S Nowotschin, M Setty, YY Kuo, V Liu, V Garg, R Sharma, CS Simon, ...
Nature 569 (7756), 361-367, 2019
3262019
Combination anti–CTLA-4 plus anti–PD-1 checkpoint blockade utilizes cellular mechanisms partially distinct from monotherapies
SC Wei, NAAS Anang, R Sharma, MC Andrews, A Reuben, JH Levine, ...
Proceedings of the National Academy of Sciences 116 (45), 22699-22709, 2019
2932019
L1CAM defines the regenerative origin of metastasis-initiating cells in colorectal cancer
K Ganesh, H Basnet, Y Kaygusuz, AM Laughney, L He, R Sharma, ...
Nature cancer 1 (1), 28-45, 2020
1752020
MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data
D Dijk, J Nainys, R Sharma, P Kaithail, AJ Carr, KR Moon, L Mazutis, ...
BioRxiv, 111591, 2017
1732017
Negative co-stimulation constrains T cell differentiation by imposing boundaries on possible cell states
SC Wei, R Sharma, NAAS Anang, JH Levine, Y Zhao, JJ Mancuso, ...
Immunity 50 (4), 1084-1098. e10, 2019
902019
Natural genetic variation reveals key features of epigenetic and transcriptional memory in virus-specific CD8 T cells
J van der Veeken, Y Zhong, R Sharma, L Mazutis, P Dao, D Pe’er, ...
Immunity 50 (5), 1202-1217. e7, 2019
512019
SEACells infers transcriptional and epigenomic cellular states from single-cell genomics data
S Persad, ZN Choo, C Dien, N Sohail, I Masilionis, R Chaligné, T Nawy, ...
Nature Biotechnology 41 (12), 1746-1757, 2023
502023
MACHETE identifies interferon-encompassing chromosome 9p21. 3 deletions as mediators of immune evasion and metastasis
FM Barriga, KM Tsanov, YJ Ho, N Sohail, A Zhang, T Baslan, AN Wuest, ...
Nature Cancer 3 (11), 1367-1385, 2022
472022
Adult human glioblastomas harbor radial glia-like cells
R Wang, R Sharma, X Shen, AM Laughney, K Funato, PJ Clark, ...
Stem Cell Reports 14 (2), 338-350, 2020
452020
CD49b defines functionally mature Treg cells that survey skin and vascular tissues
X Fan, B Moltedo, A Mendoza, AN Davydov, MB Faire, L Mazutis, ...
Journal of Experimental Medicine 215 (11), 2796-2814, 2018
392018
Engineering γδT cells limits tonic signaling associated with chimeric antigen receptors
J Fisher, R Sharma, DW Don, M Barisa, MO Hurtado, P Abramowski, ...
Science signaling 12 (598), eaax1872, 2019
362019
Machine learning integration of scleroderma histology and gene expression identifies fibroblast polarisation as a hallmark of clinical severity and improvement
K Showalter, R Spiera, C Magro, P Agius, V Martyanov, JM Franks, ...
Annals of the rheumatic diseases 80 (2), 228-237, 2021
262021
Quantum state synthesis of superconducting resonators
R Sharma, FW Strauch
Physical Review A 93 (1), 012342, 2016
192016
Learning time-varying information flow from single-cell epithelial to mesenchymal transition data
S Krishnaswamy, N Zivanovic, R Sharma, D Pe’er, B Bodenmiller
PLoS One 13 (10), e0203389, 2018
182018
Occult polyclonality of preclinical pancreatic cancer models drives in vitro evolution
ME Monberg, H Geiger, JJ Lee, R Sharma, A Semaan, V Bernard, J Wong, ...
Nature communications 13 (1), 3652, 2022
162022
States that “look the same” with respect to every basis in a mutually unbiased set
I Amburg, R Sharma, DM Sussman, WK Wootters
Journal of Mathematical Physics 55 (12), 2014
162014
Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs new combination cancer therapy strategies
A Glasner, SA Rose, R Sharma, H Gudjonson, T Chu, JA Green, ...
Nature immunology 24 (6), 1020-1035, 2023
152023
Erratum:“states that ‘look the same’with respect to every basis in a mutually unbiased set”[J. Math. Phys. 55, 122206 (2014)]
I Amburg, R Sharma, DM Sussman, WK Wootters
Journal of Mathematical Physics 56 (3), 2015
32015
Occult polyclonality of preclinical pancreatic cancer models drives in vitro evolution
ME Monberg, H Geiger, JJ Lee, R Sharma, A Semaan, V Bernard, ...
bioRxiv, 2021.04. 13.439717, 2021
22021
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