Mammalian genes are transcribed with widely different bursting kinetics DM Suter, N Molina, D Gatfield, K Schneider, U Schibler, F Naef science 332 (6028), 472-474, 2011 | 997 | 2011 |
SwissRegulon: a database of genome-wide annotations of regulatory sites M Pachkov, I Erb, N Molina, E Van Nimwegen Nucleic acids research 35 (suppl_1), D127-D131, 2007 | 159 | 2007 |
Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization N Bonhoure, G Bounova, D Bernasconi, V Praz, F Lammers, D Canella, ... Genome research 24 (7), 1157-1168, 2014 | 156 | 2014 |
Stimulus-induced modulation of transcriptional bursting in a single mammalian gene N Molina, DM Suter, R Cannavo, B Zoller, I Gotic, F Naef Proceedings of the National Academy of Sciences 110 (51), 20563-20568, 2013 | 149 | 2013 |
Structure of silent transcription intervals and noise characteristics of mammalian genes B Zoller, D Nicolas, N Molina, F Naef Molecular Systems Biology 11 (7), 1-15, 2015 | 118 | 2015 |
Circadian Dbp transcription relies on highly dynamic BMAL1-CLOCK interaction with E boxes and requires the proteasome M Stratmann, DM Suter, N Molina, F Naef, U Schibler Molecular cell 48 (2), 277-287, 2012 | 111 | 2012 |
MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences P Arnold, I Erb, M Pachkov, N Molina, E van Nimwegen Bioinformatics 28 (4), 487-494, 2012 | 105 | 2012 |
Temporal specificity and heterogeneity of Drosophila immune cells PB Cattenoz, R Sakr, A Pavlidaki, C Delaporte, A Riba, N Molina, ... The EMBO journal 39 (12), e104486, 2020 | 103 | 2020 |
Molecular co-occupancy identifies transcription factor binding cooperativity in vivo C Sönmezer, R Kleinendorst, D Imanci, G Barzaghi, L Villacorta, ... Molecular cell 81 (2), 255-267. e6, 2021 | 93 | 2021 |
Scaling laws in functional genome content across prokaryotic clades and lifestyles N Molina, E van Nimwegen Trends in genetics 25 (6), 243-247, 2009 | 77 | 2009 |
Temperature regulates splicing efficiency of the cold-inducible RNA-binding protein gene Cirbp I Gotic, S Omidi, F Fleury-Olela, N Molina, F Naef, U Schibler Genes & development 30 (17), 2005-2017, 2016 | 75 | 2016 |
Universal patterns of purifying selection at noncoding positions in bacteria N Molina, E Van Nimwegen Genome research 18 (1), 148-160, 2008 | 75 | 2008 |
Circadian clock-dependent and-independent posttranscriptional regulation underlies temporal mRNA accumulation in mouse liver J Wang, L Symul, J Yeung, C Gobet, J Sobel, S Lück, PO Westermark, ... Proceedings of the National Academy of Sciences 115 (8), E1916-E1925, 2018 | 71 | 2018 |
A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver D Canella, D Bernasconi, F Gilardi, G LeMartelot, E Migliavacca, V Praz, ... Genome research 22 (4), 666-680, 2012 | 65 | 2012 |
Multiple inputs ensure yeast cell size homeostasis during cell cycle progression C Garmendia-Torres, O Tassy, A Matifas, N Molina, G Charvin Elife 7, e34025, 2018 | 52 | 2018 |
Origins and consequences of transcriptional discontinuity DM Suter, N Molina, F Naef, U Schibler Current opinion in cell biology 23 (6), 657-662, 2011 | 52 | 2011 |
Rfx6 promotes the differentiation of peptide-secreting enteroendocrine cells while repressing genetic programs controlling serotonin production J Piccand, C Vagne, F Blot, A Meunier, A Beucher, P Strasser, ML Lund, ... Molecular metabolism 29, 24-39, 2019 | 50 | 2019 |
Imaging of native transcription factors and histone phosphorylation at high resolution in live cells S Conic, D Desplancq, A Ferrand, V Fischer, V Heyer, B Reina San Martin, ... Journal of Cell Biology 217 (4), 1537-1552, 2018 | 39 | 2018 |
Cell cycle gene regulation dynamics revealed by RNA velocity and deep-learning A Riba, A Oravecz, M Durik, S Jiménez, V Alunni, M Cerciat, M Jung, ... Nature communications 13 (1), 2865, 2022 | 36 | 2022 |
The evolution of domain-content in bacterial genomes N Molina, E van Nimwegen Biology direct 3, 1-17, 2008 | 36 | 2008 |