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Shubhra Ghosh Dastidar
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Multiple peptide conformations give rise to similar binding affinities: molecular simulations of p53-MDM2
SG Dastidar, DP Lane, CS Verma
Journal of the American Chemical Society 130 (41), 13514-13515, 2008
1012008
Structure, dynamics, and energetics of water at the surface of a small globular protein: a molecular dynamics simulation
SG Dastidar, C Mukhopadhyay
Physical Review E 68 (2), 021921, 2003
752003
HKT1; 5 transporter gene expression and association of amino acid substitutions with salt tolerance across rice genotypes
MUS Shohan, S Sinha, FH Nabila, SG Dastidar, ZI Seraj
Frontiers in Plant Science 10, 478257, 2019
482019
Modulation of p53 binding to MDM2: computational studies reveal important roles of Tyr100
SG Dastidar, DP Lane, CS Verma
BMC bioinformatics 10, 1-11, 2009
422009
Chemical states of the N-terminal “lid” of MDM2 regulate p53 binding: Simulations reveal complexities of modulation
SG Dastidar, D Raghunathan, J Nicholson, TR Hupp, DP Lane, CS Verma
Cell Cycle 10 (1), 82-89, 2011
372011
Rational design and biophysical characterization of thioredoxin-based aptamers: insights into peptide grafting
CJ Brown, SG Dastidar, HY See, DW Coomber, M Ortiz-Lombardía, ...
Journal of molecular biology 395 (4), 871-883, 2010
362010
Discrimination of ligands with different flexibilities resulting from the plasticity of the binding site in tubulin
S Chakraborti, D Chakravarty, S Gupta, BP Chatterji, G Dhar, A Poddar, ...
Biochemistry 51 (36), 7138-7148, 2012
342012
Molecular dynamics simulations of Aβ fibril interactions with β-sheet breaker peptides
NJ Bruce, D Chen, SG Dastidar, GE Marks, CH Schein, RA Bryce
Peptides 31 (11), 2100-2108, 2010
322010
Effect of structural parameters of peptides on dimer formation and highly oxidized side products in the oxidation of thiols of linear analogues of human β‐defensin 3 by DMSO
S Liu, L Zhou, L Chen, SG Dastidar, C Verma, J Li, D Tan, R Beuerman
Journal of peptide science: an official publication of the European Peptide …, 2009
292009
Cholesterol modulates membrane properties and the interaction of gp41 fusion peptide to promote membrane fusion
G Meher, S Sinha, GP Pattnaik, S Ghosh Dastidar, H Chakraborty
The Journal of Physical Chemistry B 123 (33), 7113-7122, 2019
282019
C-terminal substitution of MDM2 interacting peptides modulates binding affinity by distinctive mechanisms
CJ Brown, SG Dastidar, ST Quah, A Lim, B Chia, CS Verma
PLoS One 6 (8), e24122, 2011
282011
Anomalous behavior of water around sodium dodecyl sulphate micelles
SG Dastidar, C Mukhopadhyay
Physical Review E 70 (6), 061901, 2004
272004
Unfolding dynamics of the protein ubiquitin: insight from simulation
SG Dastidar, C Mukhopadhyay
Physical Review E 72 (5), 051928, 2005
232005
An evolutionary analysis identifies a conserved pentapeptide stretch containing the two essential lysine residues for rice L-myo-inositol 1-phosphate synthase …
P Basak, S Maitra-Majee, JK Das, A Mukherjee, S Ghosh Dastidar, ...
PloS one 12 (9), e0185351, 2017
222017
Role of protein flexibility in the discovery of new drugs
G Fuentes, SG Dastidar, A Madhumalar, CS Verma
Drug Development Research 72 (1), 26-35, 2011
212011
Forces mediating protein–protein interactions: a computational study of p53 “approaching” MDM2
SG Dastidar, A Madhumalar, G Fuentes, DP Lane, CS Verma
Theoretical Chemistry Accounts 125, 621-635, 2010
212010
Physical interaction between nuclear accumulated CC-NB-ARC-LRR protein and WRKY64 promotes EDS1 dependent Fusarium wilt resistance in chickpea
J Chakraborty, P Priya, SG Dastidar, S Das
Plant science 276, 111-133, 2018
202018
Why is F19Ap53 unable to bind MDM2? Simulations suggest crack propagation modulates binding
SG Dastidar, DP Lane, CS Verma
Cell Cycle 11 (12), 2239-2247, 2012
202012
Folding transition-state and denatured-state ensembles of FSD-1 from folding and unfolding simulations
H Lei, SG Dastidar, Y Duan
The Journal of Physical Chemistry B 110 (43), 22001-22008, 2006
202006
New insight to structure-function relationship of GalNAc mediated primary interaction between insecticidal Cry1Ac toxin and HaALP receptor of Helicoverpa armigera
A Sengupta, A Sarkar, P Priya, S Ghosh Dastidar, S Das
PloS one 8 (10), e78249, 2013
182013
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