| Electrostatic interactions in aminoglycoside-RNA complexes M Kulik, AM Goral, M Jasiński, PM Dominiak, J Trylska Biophysical Journal 108 (3), 655-665, 2015 | 43 | 2015 |
| Helix 69 of Escherichia coli 23S ribosomal RNA as a peptide nucleic acid target M Kulik, A Markowska-Zagrajek, M Wojciechowska, R Grzela, T Wituła, ... Biochimie 138, 32-42, 2017 | 28 | 2017 |
| The PI3K pathway preserves metabolic health through MARCO-dependent lipid uptake by adipose tissue macrophages JS Brunner, A Vogel, A Lercher, M Caldera, A Korosec, M Puehringer, ... Nature Metabolism 2 (12), 1427-1442, 2020 | 26 | 2020 |
| Acceleration of cryo-EM flexible fitting for large biomolecular systems by efficient space partitioning T Mori, M Kulik, O Miyashita, J Jung, F Tama, Y Sugita Structure 27 (1), 161-174. e3, 2019 | 20 | 2019 |
| Multi-scale flexible fitting of proteins to cryo-EM density maps at medium resolution M Kulik, T Mori, Y Sugita Frontiers in molecular biosciences 8, 631854, 2021 | 17 | 2021 |
| Interactions of aminoglycoside antibiotics with rRNA J Trylska, M Kulik Biochemical Society Transactions 44 (4), 987-993, 2016 | 16 | 2016 |
| Molecular mechanisms for dynamic regulation of N1 riboswitch by aminoglycosides M Kulik, T Mori, Y Sugita, J Trylska Nucleic acids research 46 (19), 9960-9970, 2018 | 10 | 2018 |
| Full-length computational model of the SARS-CoV-2 spike protein and its implications for a viral membrane fusion mechanism W Nishima, M Kulik Viruses 13 (6), 1126, 2021 | 9 | 2021 |
| Mutations of N1 riboswitch affect its dynamics and recognition by neomycin through conformational selection P Chyży, M Kulik, S Re, Y Sugita, J Trylska Frontiers in molecular biosciences 8, 633130, 2021 | 8 | 2021 |
| Bis (L-serinium) oxalate dihydrate: polymorph II M Kulik, A Pazio, K Wozniak Acta Crystallographica Section E: Structure Reports Online 69 (11), o1667-o1668, 2013 | 7 | 2013 |
| Theoretical 3D electron diffraction electrostatic potential maps of proteins modeled with a multipolar pseudoatom data bank M Kulik, ML Chodkiewicz, PM Dominiak Acta Crystallographica Section D: Structural Biology 78 (8), 1010-1020, 2022 | 5 | 2022 |
| Multipolar Atom Types from Theory and Statistical Clustering (MATTS) Data Bank: Impact of Surrounding Atoms on Electron Density from Cluster Analysis PM Rybicka, M Kulik, ML Chodkiewicz, PM Dominiak Journal of Chemical Information and Modeling 62 (16), 3766-3783, 2022 | 4 | 2022 |
| Interactions of 2’-O-methyl oligoribonucleotides with the RNA models of the 30S subunit A-site M Jasiński, M Kulik, M Wojciechowska, R Stolarski, J Trylska Plos one 13 (1), e0191138, 2018 | 4 | 2018 |
| The Role of Electrostatic Interactions in IFIT5-RNA Complexes Predicted by the UBDB+ EPMM Method UA Budniak, NK Karolak, M Kulik, K Młynarczyk, MW Górna, PM Dominiak The Journal of Physical Chemistry B 126 (45), 9152-9167, 2022 | 3 | 2022 |
| Electron density is not spherical: the many applications of the transferable aspherical atom model M Kulik, PM Dominiak Computational and Structural Biotechnology Journal 20, 6237-6243, 2022 | 2 | 2022 |
| Structural and energetic comparison of the complexes of aminoglycosides with the model of the ribosomal A-site M Kulik, J Trylska RAIRO-Operations Research 50 (2), 375-386, 2016 | 1 | 2016 |
| Molecular dynamics in multidimensional space explains how mutations affect the association path of neomycin to a riboswitch P Chyży, M Kulik, A Shinobu, S Re, Y Sugita, J Trylska Proceedings of the National Academy of Sciences 121 (15), e2317197121, 2024 | | 2024 |
| MATTS2021 data bank: application of cluster analysis to interpret electron density of atom types P Rybicka, M Kulik, ML Chodkiewicz, PM Dominiak Acta Crystallographica Section A: Foundations and Advances 78, a234-a234, 2022 | | 2022 |
| Moving quantum crystallography from sub-atomic XRD to near-atomic 3D ED PM Dominiak, ML Chodkiewicz, B Gruza, KK Jha, M Kulik, P Rybicka, ... Acta Crystallographica Section A: Foundations and Advances 77, C386-C386, 2021 | | 2021 |
| Theoretical electrostatic potential maps of macromolecules calculated with multipolar electron scattering factors M Kulik, ML Chodkiewicz, PM Dominiak Acta Crystallographica Section A: Foundations and Advances 77, C389-C389, 2021 | | 2021 |
