Ville Paakinaho
Ville Paakinaho
Academy of Finland Postdoctoral Fellow, University of Eastern Finland
確認したメール アドレス: uef.fi
タイトル引用先
Steroid Receptors Reprogram FoxA1 Occupancy through Dynamic Chromatin Transitions
EE Swinstead, TB Miranda, V Paakinaho, S Baek, I Goldstein, M Hawkins, ...
Cell 165 (3), 593-605, 2016
1232016
Glucocorticoid receptor activates poised FKBP51 locus through long-distance interactions
V Paakinaho, H Makkonen, T Jääskeläinen, JJ Palvimo
Molecular Endocrinology 24 (3), 511-525, 2010
1022010
Long-range activation of FKBP51 transcription by the androgen receptor via distal intronic enhancers
H Makkonen, M Kauhanen, V Paakinaho, T Jääskeläinen, JJ Palvimo
Nucleic acids research 37 (12), 4135-4148, 2009
932009
SUMOylation regulates the chromatin occupancy and anti-proliferative gene programs of glucocorticoid receptor
V Paakinaho, S Kaikkonen, H Makkonen, V Benes, JJ Palvimo
Nucleic Acids Research 42 (3), 1575-1592, 2014
542014
Global SUMOylation on active chromatin is an acute heat stress response restricting transcription
EA Niskanen, M Malinen, P Sutinen, S Toropainen, V Paakinaho, ...
Genome Biology 16 (1), 1-19, 2015
462015
Pioneer factors and ATP‐dependent chromatin remodeling factors interact dynamically: A new perspective
EE Swinstead, V Paakinaho, DM Presman, GL Hager
BioEssays 38 (11), 1150-1157, 2016
392016
Single-molecule analysis of steroid receptor and cofactor action in living cells
V Paakinaho, DM Presman, DA Ball, TA Johnson, RL Schiltz, P Levitt, ...
Nature Communications 8, 15896, 2017
342017
Dynamic SUMOylation is linked to the activity cycles of androgen receptor in the cell nucleus
M Rytinki, S Kaikkonen, P Sutinen, V Paakinaho, V Rahkama, JJ Palvimo
Molecular and cellular biology 32 (20), 4195-4205, 2012
332012
Transcription factor assisted loading and enhancer dynamics dictate the hepatic fasting response
I Goldstein, S Baek, DM Presman, V Paakinaho, EE Swinstead, GL Hager
Genome Research 27 (3), 427-439, 2016
292016
Quantifying transcription factor binding dynamics at the single-molecule level in live cells
DM Presman, DA Ball, V Paakinaho, JB Grimm, LD Lavis, TS Karpova, ...
Methods 123, 76-88, 2017
232017
Prostaglandin 15d-PGJ2 Inhibits Androgen Receptor Signaling in Prostate Cancer Cells
S Kaikkonen, V Paakinaho, P Sutinen, AL Levonen, JJ Palvimo
Molecular Endocrinology 27 (2), 212-223, 2013
202013
Synergistic gene expression during the acute phase response is characterized by transcription factor assisted loading
I Goldstein, V Paakinaho, S Baek, MH Sung, GL Hager
Nature Communications 8 (1), 1849, 2017
132017
Electrophilic lipid mediator 15-deoxy-Δ12, 14-prostaglandin J2 modifies glucocorticoid signaling via receptor SUMOylation
V Paakinaho, S Kaikkonen, AL Levonen, JJ Palvimo
Molecular and cellular biology 34 (17), 3202-3213, 2014
52014
Chromatin reprogramming in breast cancer
EE Swinstead, V Paakinaho, GL Hager
Endocrine-related cancer 25 (7), R385-R404, 2018
32018
Glucocorticoid receptor quaternary structure drives chromatin occupancy and transcriptional outcome
V Paakinaho, TA Johnson, DM Presman, GL Hager
Genome research 29 (8), 1223-1234, 2019
12019
TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile
K Dendoncker, S Timmermans, J Vandewalle, M Eggermont, ...
Proceedings of the National Academy of Sciences 116 (26), 12942-12951, 2019
12019
A New Model for Single-Molecule Tracking Analysis of Transcription Factor Dynamics
DA Garcia, G Fettweis, DM Presman, V Paakinaho, C Jarzynski, ...
bioRxiv, 637355, 2019
12019
Meta-analysis of Chromatin Programming by Steroid Receptors
V Paakinaho, EE Swinstead, DM Presman, L Grøntved, GL Hager
Cell Reports 28 (13), 3523-3534. e2, 2019
2019
Genome-wide Regulation of Glucocorticoid Signaling by SUMO Modifications
V Paakinaho
Publications of the University of Eastern Finland. Dissertations in Health …, 2014
2014
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