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Pascal Hingamp
Pascal Hingamp
Associate Professor, Aix Marseille University, France
Verified email at univ-amu.fr - Homepage
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Cited by
Cited by
Year
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ...
Nature genetics 29 (4), 365-371, 2001
48942001
Structure and function of the global ocean microbiome
S Sunagawa, LP Coelho, S Chaffron, JR Kultima, K Labadie, G Salazar, ...
Science 348 (6237), 1261359, 2015
23352015
Eukaryotic plankton diversity in the sunlit ocean
C De Vargas, S Audic, N Henry, J Decelle, F Mahé, R Logares, E Lara, ...
Science 348 (6237), 1261605, 2015
17092015
Plankton networks driving carbon export in the oligotrophic ocean
L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ...
Nature 532 (7600), 465-470, 2016
6922016
Patterns and ecological drivers of ocean viral communities
JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ...
Science 348 (6237), 1261498, 2015
6762015
Marine DNA viral macro-and microdiversity from pole to pole
AC Gregory, AA Zayed, N Conceição-Neto, B Temperton, B Bolduc, ...
Cell 177 (5), 1109-1123. e14, 2019
5852019
A holistic approach to marine eco-systems biology
E Karsenti, SG Acinas, P Bork, C Bowler, C De Vargas, J Raes, M Sullivan, ...
PLoS biology 9 (10), e1001177, 2011
4692011
Minimum information about an uncultivated virus genome (MIUViG)
S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ...
Nature biotechnology 37 (1), 29-37, 2019
4292019
Open science resources for the discovery and analysis of Tara Oceans data
S Pesant, F Not, M Picheral, S Kandels-Lewis, N Le Bescot, G Gorsky, ...
Scientific data 2 (1), 1-16, 2015
3872015
Metagenomic 16S rDNA I llumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities
R Logares, S Sunagawa, G Salazar, FM Cornejo‐Castillo, I Ferrera, ...
Environmental microbiology 16 (9), 2659-2671, 2014
3712014
Microbial abundance, activity and population genomic profiling with mOTUs2
A Milanese, DR Mende, L Paoli, G Salazar, HJ Ruscheweyh, M Cuenca, ...
Nature communications 10 (1), 1014, 2019
3442019
Linking virus genomes with host taxonomy
T Mihara, Y Nishimura, Y Shimizu, H Nishiyama, G Yoshikawa, H Uehara, ...
Viruses 8 (3), 66, 2016
3202016
A global ocean atlas of eukaryotic genes
Q Carradec, E Pelletier, C Da Silva, A Alberti, Y Seeleuthner, ...
Nature communications 9 (1), 373, 2018
3182018
Global trends in marine plankton diversity across kingdoms of life
FM Ibarbalz, N Henry, MC Brandão, S Martini, G Busseni, H Byrne, ...
Cell 179 (5), 1084-1097. e21, 2019
3032019
Gene expression changes and community turnover differentially shape the global ocean metatranscriptome
G Salazar, L Paoli, A Alberti, J Huerta-Cepas, HJ Ruscheweyh, M Cuenca, ...
Cell 179 (5), 1068-1083. e21, 2019
2762019
The EMBL nucleotide sequence database
W Baker, A van den Broek, E Camon, P Hingamp, P Sterk, G Stoesser, ...
Nucleic acids research 28 (1), 19-23, 2000
2182000
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
P Hingamp, N Grimsley, SG Acinas, C Clerissi, L Subirana, J Poulain, ...
The ISME journal 7 (9), 1678-1695, 2013
2142013
Standards for microarray data
CA Ball, G Sherlock, H Parkinson, P Rocca-Sera, C Brooksbank, ...
Science 298 (5593), 539-539, 2002
2142002
QDD version 3.1: A user‐friendly computer program for microsatellite selection and primer design revisited: Experimental validation of variables determining genotyping success rate
E Meglécz, N Pech, A Gilles, V Dubut, P Hingamp, A Trilles, R Grenier, ...
Molecular ecology resources 14 (6), 1302-1313, 2014
2092014
Environmental characteristics of Agulhas rings affect interocean plankton transport
E Villar, GK Farrant, M Follows, L Garczarek, S Speich, S Audic, L Bittner, ...
Science 348 (6237), 1261447, 2015
1872015
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