フォロー
James Pino
James Pino
Pino Consulting LLC
確認したメール アドレス: altoslabs.com
タイトル
引用先
引用先
Integrated, high-throughput, multiomics platform enables data-driven construction of cellular responses and reveals global drug mechanisms of action
JL Norris, MA Farrow, DB Gutierrez, LD Palmer, N Muszynski, SD Sherrod, ...
Journal of proteome research 16 (3), 1364-1375, 2017
452017
Activated oncogenic pathway modifies iron network in breast epithelial cells: a dynamic modeling perspective
J Chifman, S Arat, Z Deng, E Lemler, JC Pino, LA Harris, MA Kochen, ...
PLoS computational biology 13 (2), e1005352, 2017
292017
GPU-powered model analysis with PySB/cupSODA
LA Harris, MS Nobile, JC Pino, ALR Lubbock, D Besozzi, G Mauri, ...
Bioinformatics 33 (21), 3492-3494, 2017
222017
Proteomic and phosphoproteomic measurements enhance ability to predict ex vivo drug response in AML
SJC Gosline, C Tognon, M Nestor, S Joshi, R Modak, A Damnernsawad, ...
Clinical proteomics 19 (1), 30, 2022
182022
Chipper: Open‐source software for semi‐automated segmentation and analysis of birdsong and other natural sounds
AM Searfoss, JC Pino, N Creanza
Methods in Ecology and Evolution 11 (4), 524-531, 2020
182020
CASP11–an evaluation of a modular BCL:: fold-based protein structure prediction pipeline
AW Fischer, S Heinze, DK Putnam, B Li, JC Pino, Y Xia, CF Lopez, ...
PLoS One 11 (4), e0152517, 2016
182016
Folding propensity of intrinsically disordered proteins by osmotic stress
AL Mansouri, LN Grese, EL Rowe, JC Pino, SC Chennubhotla, ...
Molecular BioSystems 12 (12), 3695-3701, 2016
162016
CDK4/6 inhibition enhances SHP2 inhibitor efficacy and is dependent upon RB function in malignant peripheral nerve sheath tumors
J Wang, A Calizo, L Zhang, JC Pino, Y Lyu, K Pollard, X Zhang, ...
Science Advances 9 (47), eadg8876, 2023
122023
Ex vivo to in vivo model of malignant peripheral nerve sheath tumors for precision oncology
AT Larsson, H Bhatia, A Calizo, K Pollard, X Zhang, E Conniff, JF Tibbitts, ...
Neuro-oncology 25 (11), 2044-2057, 2023
102023
Proteome Mapping of the Human Pancreatic Islet Microenvironment Reveals Endocrine–Exocrine Signaling Sphere of Influence
SJC Gosline, M Veličković, JC Pino, LZ Day, IK Attah, AC Swensen, ...
Molecular & Cellular Proteomics 22 (8), 2023
82023
Probability-based mechanisms in biological networks with parameter uncertainty
OO Ortega, A Blake
bioRxiv, 2021
72021
Mapping the proteogenomic landscape enables prediction of drug response in acute myeloid leukemia
JC Pino, C Posso, SK Joshi, M Nestor, J Moon, JR Hansen, ...
Cell Reports Medicine 5 (1), 2024
62024
Processes in DNA damage response from a whole-cell multi-omics perspective
JC Pino, ALR Lubbock, LA Harris, DB Gutierrez, MA Farrow, N Muszynski, ...
Iscience 25 (11), 2022
52022
Coupling Microdroplet-Based Sample Preparation, Multiplexed Isobaric Labeling, and Nanoflow Peptide Fractionation for Deep Proteome Profiling of the Tissue Microenvironment
M Veličković, TL Fillmore, IK Attah, C Posso, JC Pino, R Zhao, ...
Analytical Chemistry 96 (32), 12973-12982, 2024
42024
CDK4/6 inhibition enhances SHP2 inhibitor efficacy and is dependent upon restoration of RB function in malignant peripheral nerve sheath tumors
J Wang, A Calizo, L Zhang, JC Pino, Y Lyu, K Pollard, X Zhang, ...
bioRxiv, 2023
32023
Ex vivo to in vivo model of malignant peripheral nerve sheath tumors for precision oncology
H Bhatia, AT Larsson, A Calizo, K Pollard, X Zhang, E Conniff, JF Tibbitts, ...
bioRxiv, 2022.04. 29.490078, 2022
22022
Selective inhibition of JAK1 primes STAT5-driven human leukemia cells for ATRA-induced differentiation
HE Ramsey, K Stengel, JC Pino, G Johnston, M Childress, AE Gorska, ...
Targeted oncology 16, 663-674, 2021
22021
High-throughput, multi-omics approach to determine and validate de novo global mechanisms of action for drugs and toxins
R Caprioli, J Wikswo, J McLean, E Skaar, JL Norris, DB Lacy, S Sherrod, ...
US Patent 10,607,721, 2020
22020
Accelerated simulations of chemical reaction systems using the stochastic simulation algorithm on GPUs
JC Pino, M Prugger, ALR Lubbock, LA Harris, CF Lopez
bioRxiv, 2020.02. 14.948612, 2020
22020
Signal execution modes emerge in biochemical reaction networks calibrated to experimental data
OO Ortega, M Ozen, BA Wilson, JC Pino, MW Irvin, GV Ildefonso, ...
Iscience 27 (6), 2024
12024
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