| Architectural protein subclasses shape 3D organization of genomes during lineage commitment JE Phillips-Cremins, MEG Sauria, A Sanyal, TI Gerasimova, BR Lajoie, ... Cell 153 (6), 1281-1295, 2013 | 1250 | 2013 |
| Chromatin states in mouse sperm correlate with embryonic and adult regulatory landscapes YH Jung, MEG Sauria, X Lyu, MS Cheema, J Ausio, J Taylor, VG Corces Cell reports 18 (6), 1366-1382, 2017 | 260 | 2017 |
| Complete genomic and epigenetic maps of human centromeres N Altemose, GA Logsdon, AV Bzikadze, P Sidhwani, SA Langley, ... Science 376 (6588), eabl4178, 2022 | 247 | 2022 |
| A complete reference genome improves analysis of human genetic variation S Aganezov, SM Yan, DC Soto, M Kirsche, S Zarate, P Avdeyev, ... Science 376 (6588), eabl3533, 2022 | 194 | 2022 |
| Lamins organize the global three-dimensional genome from the nuclear periphery X Zheng, J Hu, S Yue, L Kristiani, M Kim, M Sauria, J Taylor, Y Kim, ... Molecular Cell 71 (5), 802-815. e7, 2018 | 181 | 2018 |
| Epigenetic patterns in a complete human genome A Gershman, MEG Sauria, X Guitart, MR Vollger, PW Hook, SJ Hoyt, ... Science 376 (6588), eabj5089, 2022 | 165 | 2022 |
| The complete sequence of a human Y chromosome A Rhie, S Nurk, M Cechova, SJ Hoyt, DJ Taylor, N Altemose, PW Hook, ... Nature 621 (7978), 344-354, 2023 | 105 | 2023 |
| Measuring the reproducibility and quality of Hi-C data GG Yardımcı, H Ozadam, MEG Sauria, O Ursu, KK Yan, T Yang, ... Genome biology 20, 1-19, 2019 | 101 | 2019 |
| HiFive: a tool suite for easy and efficient HiC and 5C data analysis MEG Sauria, JE Phillips-Cremins, VG Corces, J Taylor Genome biology 16, 1-10, 2015 | 68 | 2015 |
| Characterization of button loci that promote homologous chromosome pairing and cell-type-specific interchromosomal gene regulation K Viets, MEG Sauria, C Chernoff, RR Viales, M Echterling, C Anderson, ... Developmental cell 51 (3), 341-356. e7, 2019 | 39 | 2019 |
| An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis G Xiang, CA Keller, E Heuston, BM Giardine, L An, AQ Wixom, A Miller, ... Genome research 30 (3), 472-484, 2020 | 35 | 2020 |
| Chromosome conformation paints reveal the role of lamina association in genome organization and regulation TR Luperchio, MEG Sauria, X Wong, MC Gaillard, P Tsang, K Pekrun, ... BioRxiv, 122226, 2017 | 35 | 2017 |
| QuASAR: quality assessment of spatial arrangement reproducibility in Hi-C data MEG Sauria, J Taylor BioRxiv, 204438, 2017 | 30 | 2017 |
| The repressive genome compartment is established early in the cell cycle before forming the lamina associated domains TR Luperchio, MEG Sauria, VE Hoskins, X Wong, E DeBoy, MC Gaillard, ... BioRxiv, 481598, 2018 | 29 | 2018 |
| TADs pair homologous chromosomes to promote interchromosomal gene regulation K Viets, M Sauria, C Chernoff, C Anderson, S Tran, A Dove, R Goyal, ... BioRxiv, 445627, 2018 | 7 | 2018 |
| Temporal regulation of green and red cone specification in human retinas and retinal organoids SE Hadyniak, KC Eldred, B Brenerman, KA Hussey, RC McCoy, ... bioRxiv, 2021.03. 30.437763, 2021 | 5 | 2021 |
| A complete human reference genome improves variant calling for population and clinical genomics S Aganezov, SM Yan, DC Soto, M Kirsche, S Zarate, P Avdeyev, ... bioRxiv (to appear), 2021 | 4 | 2021 |
| Hifive: a normalization approach for higherresolution hic and 5c chromosome conformation data analysis ME Sauria, JE Phillips-Cremins, VG Corces, J Taylor bioRxiv, 009951, 2014 | 4 | 2014 |
| Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes G Xiang, X He, BM Giardine, KJ Isaac, DJ Taylor, RC McCoy, C Jansen, ... bioRxiv, 2023 | 2 | 2023 |
| Retinoic acid signaling regulates spatiotemporal specification of human green and red cones SE Hadyniak, JFD Hagen, KC Eldred, B Brenerman, KA Hussey, ... Plos Biology 22 (1), e3002464, 2024 | | 2024 |
