フォロー
Zheng Liangzhen
Zheng Liangzhen
Shanghai Zelixir Biotech
確認したメール アドレス: zelixir.com
タイトル
引用先
引用先
Onionnet: a multiple-layer intermolecular-contact-based convolutional neural network for protein–ligand binding affinity prediction
L Zheng, J Fan, Y Mu
ACS omega 4 (14), 15956-15965, 2019
2522019
Structure and interactions of a host defense antimicrobial peptide thanatin in lipopolysaccharide micelles reveal mechanism of bacterial cell agglutination
S Sinha, L Zheng, Y Mu, WJ Ng, S Bhattacharjya
Scientific reports 7 (1), 17795, 2017
1002017
OnionNet-2: a convolutional neural network model for predicting protein-ligand binding affinity based on residue-atom contacting shells
Z Wang, L Zheng, Y Liu, Y Qu, YQ Li, M Zhao, Y Mu, W Li
Frontiers in chemistry 9, 753002, 2021
752021
Improving protein–ligand docking and screening accuracies by incorporating a scoring function correction term
L Zheng, J Meng, K Jiang, H Lan, Z Wang, M Lin, W Li, H Guo, Y Wei, ...
Briefings in Bioinformatics 23 (3), bbac051, 2022
712022
Comprehensive Analysis of ERK1/2 Substrates for Potential Combination Immunotherapies
L Yang, L Zheng, WJ Chng, JL Ding
Trends in Pharmacological Sciences 40 (11), 2019
512019
E2Efold-3D: end-to-end deep learning method for accurate de novo RNA 3D structure prediction
T Shen, Z Hu, Z Peng, J Chen, P Xiong, L Hong, L Zheng, Y Wang, I King, ...
arXiv preprint arXiv:2207.01586, 2022
412022
Molecular dynamics and simulation
L Zheng, AA Alhossary, CK Kwoh, Y Mu
Academic Press, 2019
412019
Phospho‐regulation of intrinsically disordered proteins for actin assembly and endocytosis
Y Miao, T Tipakornsaowapak, L Zheng, Y Mu, E Lewellyn
The FEBS journal 285 (15), 2762-2784, 2018
402018
Fimbrin phosphorylation by metaphase Cdk1 regulates actin cable dynamics in budding yeast
Y Miao, X Han, L Zheng, Y Xie, Y Mu, JR Yates III, DG Drubin
Nature communications 7 (1), 11265, 2016
392016
When homologous sequences meet structural decoys: Accurate contact prediction by tFold in CASP14—(tFold for CASP14 contact prediction)
T Shen, J Wu, H Lan, L Zheng, J Pei, S Wang, W Liu, J Huang
Proteins: Structure, Function, and Bioinformatics 89 (12), 1901-1910, 2021
362021
A fully differentiable ligand pose optimization framework guided by deep learning and a traditional scoring function
Z Wang, L Zheng, S Wang, M Lin, Z Wang, AWK Kong, Y Mu, Y Wei, W Li
Briefings in Bioinformatics 24 (1), bbac520, 2023
312023
Exploring flexibility of progesterone receptor ligand binding domain using molecular dynamics
L Zheng, VC Lin, Y Mu
PloS one 11 (11), e0165824, 2016
192016
Structure prediction of the entire proteome of monkeypox variants
L Zheng, J Meng, M Lin, R Lv, H Cheng, L Zou, J Sun, LX Li, R Ren, ...
Acta Materia Medica 1 (2), 260-264, 2022
182022
Incorporating GC pair-recognizing guanidinium into PNAs for sequence and structure specific recognition of dsRNAs over dsDNAs and ssRNAs
MS Krishna, Z Wang, L Zheng, J Bowry, AAL Ong, Y Mu, M Prabakaran, ...
Biochemistry 58 (36), 3777-3788, 2019
182019
Dynamics changes of CRISPR-Cas9 systems induced by high fidelity mutations
L Zheng, J Shi, Y Mu
Physical Chemistry Chemical Physics 20 (43), 27439-27448, 2018
162018
Boosting the predictive performance with aqueous solubility dataset curation
J Meng, P Chen, M Wahib, M Yang, L Zheng, Y Wei, S Feng, W Liu
Scientific Data 9 (1), 71, 2022
142022
Application of variational graph encoders as an effective generalist algorithm in computer-aided drug design
HYI Lam, R Pincket, H Han, XE Ong, Z Wang, J Hinks, Y Wei, W Li, ...
Nature Machine Intelligence 5 (7), 754-764, 2023
122023
fastmsa: Accelerating multiple sequence alignment with dense retrieval on protein language
L Hong, S Sun, L Zheng, Q Tan, Y Li
bioRxiv, 2021.12. 20.473431, 2021
72021
Ligand binding induces agonistic-like conformational adaptations in helix 12 of progesterone receptor ligand binding domain
L Zheng, K Xia, Y Mu
Frontiers in Chemistry 7, 315, 2019
62019
Contact-Distil: Boosting Low Homologous Protein Contact Map Prediction by Self-Supervised Distillation
Q Wang, J Chen, Y Zhou, Y Li, L Zheng, S Wang, Z Li, S Cui
Proceedings of the AAAI Conference on Artificial Intelligence 36 (4), 4620-4627, 2022
52022
現在システムで処理を実行できません。しばらくしてからもう一度お試しください。
論文 1–20