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Aki Ushiki
Aki Ushiki
Verified email at ucsf.edu
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Year
Deletion of CTCF sites in the SHH locus alters enhancer–promoter interactions and leads to acheiropodia
A Ushiki, Y Zhang, C Xiong, J Zhao, I Georgakopoulos-Soares, L Kane, ...
Nature communications 12 (1), 2282, 2021
442021
The cartilage matrisome in adolescent idiopathic scoliosis
CA Wise, D Sepich, A Ushiki, AM Khanshour, YH Kidane, N Makki, ...
Bone research 8 (1), 13, 2020
402020
De novo DNA methylation through the 5′-segment of the H19 ICR maintains its imprint during early embryogenesis
H Matsuzaki, E Okamura, T Takahashi, A Ushiki, T Nakamura, T Nakano, ...
Development 142 (22), 3833-3844, 2015
292015
Genomic characterization of the adolescent idiopathic scoliosis-associated transcriptome and regulome
N Makki, J Zhao, Z Liu, WL Eckalbar, A Ushiki, AM Khanshour, J Wu, ...
Human molecular genetics 29 (22), 3606-3615, 2020
162020
Recapitulation of gametic DNA methylation and its post-fertilization maintenance with reassembled DNA elements at the mouse Igf2/H19 locus
H Matsuzaki, D Kuramochi, E Okamura, K Hirakawa, A Ushiki, K Tanimoto
Epigenetics & Chromatin 13, 1-19, 2020
152020
Synthetic DNA fragments bearing ICR cis elements become differentially methylated and recapitulate genomic imprinting in transgenic mice
H Matsuzaki, E Okamura, D Kuramochi, A Ushiki, K Hirakawa, ...
Epigenetics & Chromatin 11, 1-11, 2018
122018
A mouse renin distal enhancer is essential for blood pressure homeostasis in BAC-rescued renin-null mutant mice
K Tanimoto, S Kanafusa, A Ushiki, H Matsuzaki, J Ishida, F Sugiyama, ...
Journal of Receptors and Signal Transduction 34 (5), 401-409, 2014
62014
Homeostatic Response of Mouse renin Gene Transcription in a Hypertensive Environment Is Mediated by a Novel 5′ Enhancer
A Ushiki, H Matsuzaki, A Fukamizu, K Tanimoto
Molecular and cellular biology 38 (7), e00566-17, 2018
22018
Deletion of Pax1 scoliosis-associated regulatory elements leads to a female-biased tail abnormality
A Ushiki, RR Sheng, Y Zhang, J Zhao, M Nobuhara, E Murray, X Ruan, ...
Cell reports 43 (3), 2024
12024
Integrative single-cell characterization of hypothalamus sex-differential and obesity-associated genes and regulatory elements
HP Nguyen, CSY Chan, DL Cintron, R Sheng, L Harshman, M Nobuhara, ...
bioRxiv, 2022.11. 06.515311, 2022
12022
Transvection-like interchromosomal interaction is not observed at the transcriptional level when tested in the Rosa26 locus in mouse
K Tanimoto, H Matsuzaki, E Okamura, A Ushiki, A Fukamizu, JD Engel
Plos one 14 (2), e0203099, 2019
12019
Long-Range Control of Renin Gene Expression in Tsukuba Hypertensive Mice
A Ushiki, H Matsuzaki, J Ishida, A Fukamizu, K Tanimoto
Plos one 11 (11), e0166974, 2016
12016
Association of genetic variation in COL11A1 with adolescent idiopathic scoliosis
H Yu, AM Khanshour, A Ushiki, N Otomo, Y Koike, E Einarsdottir, Y Fan, ...
Elife 12, RP89762, 2024
2024
EV-AAV Vector: A Novel Application of the Compound Vector for Efficient and NonInvasive Delivery In Vitro and In Vivo
P Nickl, M Barbiera, J Zini, T Nickl, I Jenickova, J Kopkanova, A Ushiki, ...
TRANSGENIC RESEARCH 32, S8-S8, 2023
2023
Variants Associated with Adolescent Idiopathic Scoliosis Perturb an Estrogen-Sensitive Pax1-Col11a1-Mmp3 Signaling Axis
C Wise, H Yu, A Khanshour, A Ushiki, N Otomo, Y Koike, E Einarsdottir, ...
American Society for Bone and Mineral Research Meeting 2023 (13/10/2023-16 …, 2023
2023
Missense variants in collagenesis genes increase risk of adolescent idiopathic scoliosis
C Wise, A Khanshour, H Yu, A Ushiki, XY Li, N Otomo, Y Koike, ...
Journal of Bone and Mineral Research 38, 66-66, 2023
2023
ADGRG6 promotes adipogenesis and is involved in sex-specific fat distribution
HP Nguyen, A Ushiki, R Sheng, C Biellak, K An, H Choquet, TJ Hoffman, ...
bioRxiv, 2022.06. 24.497411, 2022
2022
No evidence for transvection in vivo by a superenhancer:promoter pair integrated into identical open chromatin at the Rosa26 locus
K Tanimoto, H Matsuzaki, E Okamura, A Ushiki, A Fukamizu, JD Engel
bioRxiv, 393363, 2018
2018
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