Karin Verspoor

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Kevin Bretonnel CohenDirector, Biomedical Text Mining, U. Colorado School of MedicineVerified email at ucdenver.edu
Lawrence HunterProfessor of Pharmacology, University of Colorado School of MedicineVerified email at CUAnschutz.edu
Timothy BaldwinMBZUAI and The University of MelbourneVerified email at unimelb.edu.au
Antonio Jimeno YepesSchool of Computing Technologies, RMIT UniversityVerified email at rmit.edu.au
William A Baumgartner JrResearch Associate, University of Colorado DenverVerified email at ucdenver.edu
Christophe RoederUCDenverVerified email at ucdenver.edu
Justin ZobelComputing and Information Systems, University of MelbourneVerified email at unimelb.edu.au
Aurelie NeveolCNRSVerified email at limsi.fr
Christopher FunkPhD student, University of Colorado Medical SchoolVerified email at ucdenver.edu
Mariana Lara NevesGerman Federal Institute for Risk AssessmentVerified email at bfr.bund.de
Cliff A JoslynChief Knowledge Scientist, Math of Data Science Team Lead, Pacific Northwest National LaboratoryVerified email at pnnl.gov
Michael BadaResearch Associate, University of Colorado Anschutz Medical CampusVerified email at ucdenver.edu
Haibin LiuStaff Scientist at NCBI/NLM/NIHVerified email at nih.gov
Trevor CohnSchool of Computing and Information Systems, University of MelbourneVerified email at unimelb.edu.au
Patrick Cheong-Iao PangFaculty of Applied Sciences, Macao Polytechnic UniversityVerified email at ipm.edu.mo
Lawrence CavedonSchool of Computing Technologies, RMIT UniversityVerified email at rmit.edu.au
Judith D. CohnResearch Scientist, Los Alamos National LaboratoryVerified email at lanl.gov
Shanton ChangProfessor, School of Computing and Information Systems, The University of MelbourneVerified email at unimelb.edu.au
James BaileyProfessor, School of Computing and Information Systems, University of MelbourneVerified email at unimelb.edu.au
Simone Romano⚗👁💭🏕Verified email at simoneromano.com

Karin Verspoor

Executive Dean, School of Computing Technologies, RMIT University

Verified email at rmit.edu.au - Homepage

artificial intelligence in medicine health informatics computational biology natural language processing BioNLP


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A large-scale evaluation of computational protein function prediction P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ... Nature methods 10 (3), 221-227, 2013	867	2013
Findings of the 2017 conference on machine translation (wmt17) O Bojar, R Chatterjee, C Federmann, Y Graham, B Haddow, S Huang, ... Proceedings of the Second Conference on Machine Translation, 169-214, 2017	631	2017
Findings of the 2016 Conference on Machine Translation (WMT16) O Bojar, R Chatterjee, C Federmann, Y Graham, B Haddow, M Huck, ...	553*	2016
An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 1-19, 2016	328	2016
SemEval-2017 Task 3: Community Question Answering H Mubarak, T Baldwin, K Verspoor	296*	2017
Contextually-dependent lexical semantics CM Verspoor University of Edinburgh. College of Science and Engineering. School of …, 1997	258	1997
Concept Annotation in the CRAFT corpus M Bada, M Eckert, D Evans, K Garcia, K Shipley, D Sitnikov, CKB B AW Jr, ... BMC Bioinformatics 13 (161), 2012	231	2012
The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7 (1), 1-17, 2015	202	2015
BioC: a minimalist approach to interoperability for biomedical text processing. DC Comeau, P Ciccarese, KB Cohen, M Krallinger, F Leitner, Z Lu, ... Database: the journal of biological databases and curation 2013, bat064-bat064, 2013	184	2013
Big data in medicine is driving big changes F Martin-Sanchez, K Verspoor Yearbook of medical informatics 23 (01), 14-20, 2014	164	2014
The structural and content aspects of abstracts versus bodies of full text journal articles are different KB Cohen, HL Johnson, K Verspoor, C Roeder, LE Hunter BMC bioinformatics 11 (1), 1-10, 2010	164	2010
The gene normalization task in BioCreative III Z Lu, HY Kao, CH Wei, M Huang, J Liu, CJ Kuo, CN Hsu, RTH Tsai, ... BMC bioinformatics 12 (8), 1-19, 2011	161	2011
Automatic English-Chinese name transliteration for development of multilingual resources S Wan, K Verspoor 36th Annual Meeting of the Association for Computational Linguistics and …, 1998	158	1998
BioLemmatizer: a lemmatization tool for morphological processing of biomedical text H Liu, T Christiansen, WA Baumgartner, K Verspoor Journal of biomedical semantics 3 (1), 1-29, 2012	155	2012
A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools KM Verspoor, KB Cohen, A Lanfranchi, C Warner, HL Johnson, C Roeder, ... BMC Bioinformatics 13 (207), 2012	122	2012
Adjusting for chance clustering comparison measures S Romano, NX Vinh, J Bailey, K Verspoor The Journal of Machine Learning Research 17 (1), 4635-4666, 2016	119	2016
Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters C Funk, W Baumgartner, B Garcia, C Roeder, M Bada, KB Cohen, ... BMC bioinformatics 15 (1), 1-29, 2014	116	2014
Standardized mutual information for clustering comparisons: one step further in adjustment for chance S Romano, J Bailey, V Nguyen, K Verspoor International Conference on Machine Learning, 1143-1151, 2014	97	2014
Biomedical text mining: state-of-the-art, open problems and future challenges A Holzinger, J Schantl, M Schroettner, C Seifert, K Verspoor Interactive knowledge discovery and data mining in biomedical informatics …, 2014	91	2014
A categorization approach to automated ontological function annotation K Verspoor, J Cohn, S Mniszewski, C Joslyn Protein Science 15 (6), 1544-1549, 2006	87	2006

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