Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 2041* | 2019 |
Functional overlap of the Arabidopsis leaf and root microbiota Y Bai, DB Müller, G Srinivas, R Garrido-Oter, E Potthoff, M Rott, ... Nature 528 (7582), 364-369, 2015 | 556 | 2015 |
Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 346 | 2017 |
The plant microbiota: systems-level insights and perspectives DB Müller, C Vogel, Y Bai, JA Vorholt Annual review of genetics 50, 211-234, 2016 | 266 | 2016 |
Core microbiomes for sustainable agroecosystems H Toju, KG Peay, M Yamamichi, K Narisawa, K Hiruma, K Naito, S Fukuda, ... Nature Plants 4 (5), 247-257, 2018 | 208 | 2018 |
NRT1. 1B is associated with root microbiota composition and nitrogen use in field-grown rice J Zhang, YX Liu, N Zhang, B Hu, T Jin, H Xu, Y Qin, P Yan, X Zhang, ... Nature biotechnology 37 (6), 676-684, 2019 | 132 | 2019 |
A specialized metabolic network selectively modulates Arabidopsis root microbiota AC Huang, T Jiang, YX Liu, YC Bai, J Reed, B Qu, A Goossens, ... Science 364 (6440), 2019 | 108 | 2019 |
Rhizobacterial volatiles and photosynthesis‐related signals coordinate MYB72 expression in Arabidopsis roots during onset of induced systemic resistance and … C Zamioudis, J Korteland, JA Van Pelt, M van Hamersveld, N Dombrowski, ... The Plant Journal 84 (2), 309-322, 2015 | 99 | 2015 |
Expression of the Nitrate Transporter Gene OsNRT1.1A/OsNPF6.3 Confers High Yield and Early Maturation in Rice W Wang, B Hu, D Yuan, Y Liu, R Che, Y Hu, S Ou, Y Liu, Z Zhang, ... The Plant Cell 30 (3), 638-651, 2018 | 96 | 2018 |
Root exudates drive the soil-borne legacy of aboveground pathogen infection J Yuan, J Zhao, T Wen, M Zhao, R Li, P Goossens, Q Huang, Y Bai, ... Microbiome 6 (1), 1-12, 2018 | 80 | 2018 |
Soil pH correlates with the co-occurrence and assemblage process of diazotrophic communities in rhizosphere and bulk soils of wheat fields K Fan, P Weisenhorn, JA Gilbert, Y Shi, Y Bai, H Chu Soil Biology and Biochemistry 121, 185-192, 2018 | 70 | 2018 |
Plant-derived coumarins shape the composition of an Arabidopsis synthetic root microbiome MJ Voges, Y Bai, P Schulze-Lefert, ES Sattely Proceedings of the National Academy of Sciences 116 (25), 12558-12565, 2019 | 67 | 2019 |
Root microbiota shift in rice correlates with resident time in the field and developmental stage J Zhang, N Zhang, YX Liu, X Zhang, B Hu, Y Qin, H Xu, H Wang, X Guo, ... Science China Life Sciences 61 (6), 613-621, 2018 | 52 | 2018 |
QIIME 2: reproducible, interactive, scalable, and extensible microbiome data science E Boylen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints 6, e27295v2, 2018 | 39 | 2018 |
Tissue layer specific regulation of leaf length and width in Arabidopsis as revealed by the cell autonomous action of ANGUSTIFOLIA Y Bai, S Falk, A Schnittger, MJ Jakoby, M Hülskamp The Plant Journal 61 (2), 191-199, 2010 | 33 | 2010 |
Taxonomic structure and functional association of foxtail millet root microbiome T Jin, Y Wang, Y Huang, J Xu, P Zhang, N Wang, X Liu, H Chu, G Liu, ... Gigascience 6 (10), 1-12, 2017 | 26 | 2017 |
Reductionist synthetic community approaches in root microbiome research YX Liu, Y Qin, Y Bai Current opinion in microbiology 49, 97-102, 2019 | 24 | 2019 |
Recently duplicated sesterterpene (C25) gene clusters in Arabidopsis thaliana modulate root microbiota Q Chen, T Jiang, YX Liu, H Liu, T Zhao, Z Liu, X Gan, A Hallab, X Wang, ... Science China Life Sciences 62 (7), 947-958, 2019 | 19 | 2019 |
Core microbiomes for sustainable agroecosystems. Nat Plants 4: 247–257 H Toju, KG Peay, M Yamamichi, K Narisawa, K Hiruma, K Naito, S Fukuda, ... | 18 | 2018 |
ANGUSTIFOLIA is a central component of tissue morphogenesis mediated by the atypical receptor-like kinase STRUBBELIG Y Bai, P Vaddepalli, L Fulton, H Bhasin, M Hülskamp, K Schneitz BMC plant biology 13 (1), 1-12, 2013 | 17 | 2013 |