The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 1003 | 2014 |
Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions H Nishihara, M Hasegawa, N Okada Proceedings of the National Academy of Sciences 103 (26), 9929-9934, 2006 | 274 | 2006 |
Functional noncoding sequences derived from SINEs in the mammalian genome H Nishihara, AFA Smit, N Okada Genome research 16 (7), 864-874, 2006 | 268 | 2006 |
Possible involvement of SINEs in mammalian-specific brain formation T Sasaki, H Nishihara, M Hirakawa, K Fujimura, M Tanaka, N Kokubo, ... Proceedings of the National Academy of Sciences 105 (11), 4220-4225, 2008 | 211 | 2008 |
Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals H Nishihara, S Maruyama, N Okada Proceedings of the National Academy of Sciences 106 (13), 5235-5240, 2009 | 196 | 2009 |
B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes K Yoshida, Y Terai, S Mizoiri, M Aibara, H Nishihara, M Watanabe, ... PLoS genetics 7 (8), e1002203, 2011 | 163 | 2011 |
A retroposon analysis of Afrotherian phylogeny H Nishihara, Y Satta, M Nikaido, JGM Thewissen, MJ Stanhope, N Okada Molecular biology and evolution 22 (9), 1823-1833, 2005 | 118 | 2005 |
Rooting the eutherian tree: the power and pitfalls of phylogenomics H Nishihara, N Okada, M Hasegawa Genome biology 8 (9), R199, 2007 | 116 | 2007 |
Coelacanth genomes reveal signatures for evolutionary transition from water to land M Nikaido, H Noguchi, H Nishihara, A Toyoda, Y Suzuki, R Kajitani, ... Genome research 23 (10), 1740-1748, 2013 | 112 | 2013 |
Ancient SINEs from African endemic mammals M Nikaido, H Nishihara, Y Hukumoto, N Okada Molecular Biology and Evolution 20 (4), 522-527, 2003 | 97 | 2003 |
Characterization of novel Alu-and tRNA-related SINEs from the tree shrew and evolutionary implications of their origins H Nishihara, Y Terai, N Okada Molecular biology and evolution 19 (11), 1964-1972, 2002 | 96 | 2002 |
A mammalian conserved element derived from SINE displays enhancer properties recapitulating Satb2 expression in early-born callosal projection neurons K Tashiro, A Teissier, N Kobayashi, A Nakanishi, T Sasaki, K Yan, ... PloS one 6 (12), e28497, 2011 | 60 | 2011 |
The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis O Piskurek, H Nishihara, N Okada Gene 441 (1-2), 111-118, 2009 | 50 | 2009 |
Coordinately co-opted multiple transposable elements constitute an enhancer for wnt5a expression in the mammalian secondary palate H Nishihara, N Kobayashi, C Kimura-Yoshida, K Yan, O Bormuth, Q Ding, ... PLoS Genetics 12 (10), e1006380, 2016 | 48 | 2016 |
Phylogeny of galactolipid synthase homologs together with their enzymatic analyses revealed a possible origin and divergence time for photosynthetic membrane biogenesis Y Yuzawa, H Nishihara, T Haraguchi, S Masuda, M Shimojima, ... DNA research 19 (1), 91-102, 2012 | 48 | 2012 |
Reverse evolution in RH1 for adaptation of cichlids to water depth in Lake Tanganyika H Nagai, Y Terai, T Sugawara, H Imai, H Nishihara, M Hori, N Okada Molecular biology and evolution 28 (6), 1769-1776, 2011 | 43 | 2011 |
A SINE-derived element constitutes a unique modular enhancer for mammalian diencephalic Fgf8 A Nakanishi, N Kobayashi, A Suzuki-Hirano, H Nishihara, T Sasaki, ... PloS one 7 (8), e43785, 2012 | 40 | 2012 |
Emergence of mammals by emergency: exaptation N Okada, T Sasaki, T Shimogori, H Nishihara Genes to Cells 15 (8), 801-812, 2010 | 39 | 2010 |
Hamster PIWI proteins bind to piRNAs with stage-specific size variations during oocyte maturation K Ishino, H Hasuwa, J Yoshimura, YW Iwasaki, H Nishihara, NM Seki, ... Nucleic Acids Research 49 (5), 2700–2720, 2021 | 37 | 2021 |
Transposable elements as genetic accelerators of evolution: contribution to genome size, gene regulatory network rewiring and morphological innovation H Nishihara Genes & Genetic Systems 94 (6), 269-281, 2019 | 37 | 2019 |