| Initial sequencing and comparative analysis of the mouse genome AT Chinwalla, LL Cook, KD Delehaunty, GA Fewell, LA Fulton, RS Fulton, ... Nature 420 (6915), 520-562, 2002 | 8650* | 2002 |
| A greedy algorithm for aligning DNA sequences Z Zhang, S Schwartz, L Wagner, W Miller Journal of Computational biology 7 (1-2), 203-214, 2000 | 6348 | 2000 |
| Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004 | 2552 | 2004 |
| Human–mouse alignments with BLASTZ S Schwartz, WJ Kent, A Smit, Z Zhang, R Baertsch, RC Hardison, ... Genome research 13 (1), 103-107, 2003 | 2084 | 2003 |
| PipMaker—a web server for aligning two genomic DNA sequences S Schwartz, Z Zhang, KA Frazer, A Smit, C Riemer, J Bouck, R Gibbs, ... Genome research 10 (4), 577-586, 2000 | 1415 | 2000 |
| A universal SNP and small-indel variant caller using deep neural networks R Poplin, PC Chang, D Alexander, S Schwartz, T Colthurst, A Ku, ... Nature biotechnology 36 (10), 983-987, 2018 | 1174 | 2018 |
| Comparative analyses of multi-species sequences from targeted genomic regions JW Thomas, JW Touchman, RW Blakesley, GG Bouffard, ... Nature 424 (6950), 788-793, 2003 | 784 | 2003 |
| Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, ... Genome research 13 (1), 13-26, 2003 | 360 | 2003 |
| MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences S Schwartz, L Elnitski, M Li, M Weirauch, C Riemer, A Smit, NCS Program, ... Nucleic acids research 31 (13), 3518-3524, 2003 | 277 | 2003 |
| Why do miRNAs live in the miRNP? DS Schwarz, PD Zamore Genes & development 16 (9), 1025-1031, 2002 | 188 | 2002 |
| Distinguishing regulatory DNA from neutral sites L Elnitski, RC Hardison, J Li, S Yang, D Kolbe, P Eswara, MJ O'Connor, ... Genome Research 13 (1), 64-72, 2003 | 173 | 2003 |
| Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its syntenic region in mouse chromosome 6 MA Ansari-Lari, JC Oeltjen, S Schwartz, Z Zhang, DM Muzny, J Lu, ... Genome Research 8 (1), 29-40, 1998 | 165 | 1998 |
| Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes S Yang, AF Smit, S Schwartz, F Chiaromonte, KM Roskin, D Haussler, ... Genome research 14 (4), 517-527, 2004 | 105 | 2004 |
| Generation and comparative analysis of∼ 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11. 23 implicated in Williams syndrome U DeSilva, L Elnitski, JR Idol, JL Doyle, W Gan, JW Thomas, S Schwartz, ... Genome research 12 (1), 3-15, 2002 | 99 | 2002 |
| Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment ET Dermitzakis, E Kirkness, S Schwarz, E Birney, A Reymond, ... Genome research 14 (5), 852-859, 2004 | 95 | 2004 |
| Parallelization of a local similarity algorithm X Huang, W Miller, S Schwartz, RC Hardison Bioinformatics 8 (2), 155-165, 1992 | 92 | 1992 |
| Comparative analysis of the gene-dense ACHE/TFR2 region on human chromosome 7q22 with the orthologous region on mouse chromosome 5 MD Wilson, C Riemer, DW Martindale, P Schnupf, AP Boright, TL Cheung, ... Nucleic Acids Research 29 (6), 1352-1365, 2001 | 76 | 2001 |
| GALA, a database for genomic sequence alignments and annotations B Giardine, L Elnitski, C Riemer, I Makalowska, S Schwartz, W Miller, ... Genome research 13 (4), 732-741, 2003 | 62 | 2003 |
| PipTools: a computational toolkit to annotate and analyze pairwise comparisons of genomic sequences L Elnitski, C Riemer, H Petrykowska, L Florea, S Schwartz, W Miller, ... Genomics 80 (6), 681-690, 2002 | 57 | 2002 |
| Analysis of conserved domains and sequence motifs in cellular regulatory proteins and locus control regions using new software tools for multiple alignment and visualization. MS Boguski, RC Hardison, S Schwartz, W Miller The New Biologist 4 (3), 247-260, 1992 | 54 | 1992 |
Webb MillerPenn State University, UC Santa Barbara, ArizonaVerified email at bx.psu.edu
