| The impact of the branched-chain ketoacid dehydrogenase complex on amino acid homeostasis in Arabidopsis C Peng, S Uygun, SH Shiu, RL Last Plant Physiology 169 (3), 1807-1820, 2015 | 110 | 2015 |
| Diversity, expansion, and evolutionary novelty of plant DNA-binding transcription factor families MD Lehti-Shiu, N Panchy, P Wang, S Uygun, SH Shiu Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1860 (1), 3-20, 2017 | 93 | 2017 |
| Utility and limitations of using gene expression data to identify functional associations S Uygun, C Peng, MD Lehti-Shiu, RL Last, SH Shiu PLoS computational biology 12 (12), e1005244, 2016 | 56 | 2016 |
| Measuring semantic similarities by combining gene ontology annotations and gene co-function networks J Peng, S Uygun, T Kim, Y Wang, SY Rhee, J Chen BMC bioinformatics 16, 1-14, 2015 | 51 | 2015 |
| Recovery from N Deprivation Is a Transcriptionally and Functionally Distinct State in Chlamydomonas CH Tsai, S Uygun, R Roston, SH Shiu, C Benning Plant Physiology 176 (3), 2007-2023, 2018 | 35 | 2018 |
| Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana MD Lehti-Shiu, S Uygun, GD Moghe, N Panchy, L Fang, DE Hufnagel, ... Plant physiology 168 (4), 1717-1734, 2015 | 33 | 2015 |
| Phase II Trial of Neoadjuvant Carboplatin and Nab‐Paclitaxel in Patients with Triple‐Negative Breast Cancer Y Yuan, JS Lee, SE Yost, SM Li, PH Frankel, C Ruel, D Schmolze, ... The Oncologist 26 (3), e382-e393, 2021 | 31 | 2021 |
| Cis-regulatory code for predicting plant cell-type transcriptional response to high salinity S Uygun, CB Azodi, SH Shiu Plant physiology 181 (4), 1739-1751, 2019 | 28 | 2019 |
| Regulatory divergence in wound-responsive gene expression between domesticated and wild tomato MJ Liu, K Sugimoto, S Uygun, N Panchy, MS Campbell, M Yandell, ... The Plant Cell 30 (7), 1445-1460, 2018 | 26 | 2018 |
| Predictive models of spatial transcriptional response to high salinity S Uygun, AE Seddon, CB Azodi, SH Shiu Plant physiology 174 (1), 450-464, 2017 | 25 | 2017 |
| The SEEL motif and members of the MYB-related REVEILLE transcription factor family are important for the expression of LORELEI in the synergid cells of the Arabidopsis female … JA Noble, A Seddon, S Uygun, A Bright, SE Smith, S Shiu, R Palanivelu Plant Reproduction, 1-16, 2022 | 5 | 2022 |
| Disparities within luminal breast cancer: Clinical and molecular features of African American and non-Hispanic white patients. K Hoskins, OC Danciu, VK Gadi, Y Simons, LE Blumencranz, H Kling, ... Journal of Clinical Oncology 39 (15_suppl), 1009-1009, 2021 | 4 | 2021 |
| Optimising the use of gene expression data to predict plant metabolic pathway memberships P Wang, BM Moore, S Uygun, MD Lehti‐Shiu, CS Barry, SH Shiu New Phytologist 231 (1), 475-489, 2021 | 3 | 2021 |
| Optimizing the use of gene expression data to predict metabolic pathway memberships with unsupervised and supervised machine learning P Wang, BM Moore, S Uygun, MD Lehti-Shiu, C Barry, SH Shiu bioRxiv, 2020.07. 15.204222, 2020 | 1 | 2020 |
| Impact of race on BluePrint genomic subtyping in HER2+ breast cancer. S Reid, T Pal, XO Shu, L Venton, JG Whisenant, K Hoskins, E Dias, ... Journal of Clinical Oncology 41 (16_suppl), 564-564, 2023 | | 2023 |
| Investigation of a genomic signature for transcription factor MAF gene amplification and lack of bisphosphonate benefit in early breast cancer. A Nasrazadani, JL Gomez Marti, T Hyder, S Uygun, LE Blumencranz, ... Journal of Clinical Oncology 40 (16_suppl), 559-559, 2022 | | 2022 |
| 234P Equivalence of NGS-based MammaPrint 70-gene signature risk of recurrence and BluePrint 80-gene signature of molecular subtyping tests to the centralized microarray tests E Schuler, S Uygun, L Mittempergher, D Pronin, S Mee, S Bao, T Cavness, ... Annals of Oncology 33, S232, 2022 | | 2022 |
| Racial disparities within Basal-type breast cancer: clinical and molecular features of African American and Caucasian obese patients D Sharma, LE Blumencranz, HM Kling, S Uygun, S Untch, W Audeh, ... CANCER RESEARCH 81 (4), 2021 | | 2021 |
| MammaPrint and BluePrint Next-Generation Sequencing (NGS) Results Are Robust and Accurate for Patients with Early Stage Breast Cancer D Kingma, S Uygun, C Zanette, S Mee, A Witteveen, L Delahaye, ... JOURNAL OF MOLECULAR DIAGNOSTICS 22 (11), S63-S63, 2020 | | 2020 |
| 12-chemokine gene expression score in breast cancer patients treated with neoadjuvant chemotherapy. HH Soliman, S Prabhakaran, M Rosa, CE Cox, PW Whitworth, S Uygun, ... Journal of Clinical Oncology 38 (15), 2020 | | 2020 |
Shin-Han ShiuProfessor of Plant Biology and Computational Math., Sci., & Engr., Michigan State UniversityVerified email at msu.edu
