| Network-based survival analysis reveals subnetwork signatures for predicting outcomes of ovarian cancer treatment W Zhang, T Ota, V Shridhar, J Chien, B Wu, R Kuang PLoS computational biology 9 (3), e1002975, 2013 | 181 | 2013 |
| Network-based Machine Learning and Graph Theory Algorithms for Precision Oncology W Zhang, J Chien, J Yong, R Kuang npj Precision Oncology 1 (1), 25, 2017 | 118 | 2017 |
| AlignS: A processing-in-memory accelerator for DNA short read alignment leveraging SOT-MRAM S Angizi, J Sun, W Zhang, D Fan Proceedings of the 56th Annual Design Automation Conference 2019, 1-6, 2019 | 96 | 2019 |
| mRNA 3′-UTR shortening is a molecular signature of mTORC1 activation JW Chang, W Zhang, HS Yeh, EP de Jong, S Jun, KH Kim, SS Bae, ... Nature Communications 6, 2015 | 88 | 2015 |
| A Graph Processing Accelerator Leveraging SOT-MRAM S Angizi, J Sun, W Zhang, D Fan 2019 Design, Automation & Test in Europe Conference & Exhibition (DATE), 2019 | 61 | 2019 |
| Multi-omics data integration by generative adversarial network KT Ahmed, J Sun, S Cheng, J Yong, W Zhang Bioinformatics 38 (1), 179-186, 2022 | 56 | 2022 |
| Inferring disease and gene set associations with rank coherence in networks TH Hwang, W Zhang, M Xie, J Liu, R Kuang Bioinformatics 27 (19), 2692-2699, 2011 | 52 | 2011 |
| Investigating Chaperonin-Containing TCP-1 subunit 2 as an essential component of the chaperonin complex for tumorigenesis AE Showalter, AC Martini, D Nierenberg, K Hosang, NA Fahmi, ... Scientific reports 10 (1), 798, 2020 | 47 | 2020 |
| A new validity measure for a correlation-based fuzzy c-means clustering algorithm M Zhang, W Zhang, H Sicotte, P Yang 2009 Annual International Conference of the IEEE Engineering in Medicine and …, 2009 | 40 | 2009 |
| Network-based drug sensitivity prediction WZ Ahmed, Khandakar Tanvir, Sunho Park, Qibing Jiang, Yunku Yeu, TaeHyun Hwang BMC Medical Genomics 13 (193), 2020 | 37 | 2020 |
| DARPP-32 and t-DARPP promote non-small cell lung cancer growth through regulation of IKKα-dependent cell migration LHH Sk. Kayum Alam, Matteo Astone, Ping Liu, Stephanie R Hall, Abbygail M ... Communications Biology 1 (43), 2018 | 35 | 2018 |
| PIM-Aligner: A processing-in-MRAM platform for biological sequence alignment S Angizi, J Sun, W Zhang, D Fan 2020 Design, Automation & Test in Europe Conference & Exhibition (DATE …, 2020 | 34 | 2020 |
| Meta-Analysis of EMT Datasets Reveals Different Types of EMT L Liang, H Sun, W Zhang, M Zhang, X Yang, R Kuang, H Zheng PLoS One 11, e0156839, 2016 | 33 | 2016 |
| An integrative model for alternative polyadenylation, IntMAP, delineates mTOR-modulated endoplasmic reticulum stress response JW Chang, W Zhang, HS Yeh, P Meeyeon, C Yao, Y Shi, R Kuang, ... Nucleic Acids Research, 2018 | 32 | 2018 |
| Vasodilator-stimulated phosphoprotein promotes liver metastasis of gastrointestinal cancer by activating a β1-integrin-FAK-YAP1/TAZ signaling pathway NK Xiaoyu Xiang, Yuanguo Wang, Hongbin Zhang, Jinhua Piao, Selvaraj ... npj Precision Oncology 2 (2), 45, 2018 | 30* | 2018 |
| Pim-assembler: A processing-in-memory platform for genome assembly S Angizi, NA Fahmi, W Zhang, D Fan 2020 57th ACM/IEEE design automation conference (DAC), 1-6, 2020 | 29 | 2020 |
| Network-based isoform quantification with RNA-seq data for cancer transcriptome analysis W Zhang, JW Chang, L Lin, K Minn, B Wu, J Chien, J Yong, H Zheng, ... PLoS computational biology 11 (12), e1004465, 2015 | 20 | 2015 |
| Signed network propagation for detecting differential gene expressions and DNA copy number variations W Zhang, N Johnson, B Wu, R Kuang Proceedings of the ACM conference on bioinformatics, computational biology …, 2012 | 20 | 2012 |
| Network-based multi-task learning models for biomarker selection and cancer outcome prediction Z Wang, Z He, M Shah, T Zhang, D Fan, W Zhang Bioinformatics 36 (6), 1814-1822, 2020 | 19 | 2020 |
| mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control JW Chang, HS Yeh, M Park, L Erber, J Sun, S Cheng, AM Bui, NA Fahmi, ... Nucleic acids research 47 (19), 10373-10387, 2019 | 17 | 2019 |
Jeongsik YongVerified email at umn.edu
