Rate-Limiting Steps in Yeast Protein Translation P Shah, Y Ding, M Niemczyk, G Kudla, JB Plotkin Cell 153 (7), 1589-1601, 2013 | 520 | 2013 |
The role of epistasis in protein evolution DM McCandlish, E Rajon, P Shah, Y Ding, JB Plotkin Nature 497 (7451), E1-E2, 2013 | 57 | 2013 |
Weak 5′-mRNA Secondary Structures in Short Eukaryotic Genes Y Ding, P Shah, JB Plotkin Genome Biology and Evolution 4 (10), 1046-1053, 2012 | 29 | 2012 |
On agreement forests Y Ding, S Grünewald, PJ Humphries Journal of Combinatorial Theory, Series A 118 (7), 2059-2065, 2011 | 18 | 2011 |
COMIT: identification of noncoding motifs under selection in coding sequences D Kural, Y Ding, J Wu, A Korpi, J Chuang Genome biology 10 (11), R133, 2009 | 11 | 2009 |
CodingMotif: exact determination of overrepresented nucleotide motifs in coding sequences Y Ding, WA Lorenz, JH Chuang BMC bioinformatics 13 (1), 1-16, 2012 | 6 | 2012 |
Computing the Probability of RNA Hairpin and Multiloop Formation Y Ding, WA Lorenz, I Dotu, E Senter, P Clote Journal of Computational Biology 21 (3), 201-218, 2014 | 2 | 2014 |