ChIP‐Atlas: a data‐mining suite powered by full integration of public ChIP‐seq data S Oki, T Ohta, G Shioi, H Hatanaka, O Ogasawara, Y Okuda, H Kawaji, ... EMBO reports 19 (12), e46255, 2018 | 604 | 2018 |
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases M Lizio, I Abugessaisa, S Noguchi, A Kondo, A Hasegawa, CC Hon, ... Nucleic acids research 47 (D1), D752-D758, 2019 | 200 | 2019 |
Left–right patterning of the mouse lateral plate requires nodal produced in the node Y Saijoh, S Oki, S Ohishi, H Hamada Developmental biology 256 (1), 161-173, 2003 | 165 | 2003 |
ChIP-Atlas 2021 update: a data-mining suite for exploring epigenomic landscapes by fully integrating ChIP-seq, ATAC-seq and Bisulfite-seq data Z Zou, T Ohta, F Miura, S Oki Nucleic acids research 50 (W1), W175-W182, 2022 | 154 | 2022 |
Epiblast ground state is controlled by canonical Wnt/β-catenin signaling in the postimplantation mouse embryo and epiblast stem cells T Sumi, S Oki, K Kitajima, C Meno PloS one 8 (5), e63378, 2013 | 124 | 2013 |
Sulfated glycosaminoglycans are necessary for Nodal signal transmission from the node to the left lateral plate in the mouse embryo S Oki, R Hashimoto, Y Okui, MM Shen, E Mekada, H Otani, Y Saijoh, ... Development 134 (21), 3893-3904, 2007 | 100 | 2007 |
FTO demethylates cyclin D1 mRNA and controls cell-cycle progression M Hirayama, FY Wei, T Chujo, S Oki, M Yakita, D Kobayashi, N Araki, ... Cell reports 31 (1), 2020 | 68 | 2020 |
Reversal of left-right asymmetry induced by aberrant Nodal signaling in the node of mouse embryos S Oki, K Kitajima, S Marques, JA Belo, T Yokoyama, H Hamada, C Meno Development 136 (23), 3917-3925, 2009 | 51 | 2009 |
ChIP-seq analysis of genomic binding regions of five major transcription factors highlights a central role for ZIC2 in the mouse epiblast stem cell gene regulatory network K Matsuda, T Mikami, S Oki, H Iida, M Andrabi, JM Boss, K Yamaguchi, ... Development 144 (11), 1948-1958, 2017 | 50 | 2017 |
Two nodal‐responsive enhancers control left–right asymmetric expression of Nodal Y Saijoh, S Oki, C Tanaka, T Nakamura, H Adachi, YT Yan, MM Shen, ... Developmental dynamics: an official publication of the American Association …, 2005 | 47 | 2005 |
Paternal age affects offspring via an epigenetic mechanism involving REST/NRSF K Yoshizaki, R Kimura, H Kobayashi, S Oki, T Kikkawa, L Mai, K Koike, ... EMBO reports 22 (2), e51524, 2021 | 45 | 2021 |
Wnt signaling regulates left–right axis formation in the node of mouse embryos K Kitajima, S Oki, Y Ohkawa, T Sumi, C Meno Developmental biology 380 (2), 222-232, 2013 | 44 | 2013 |
LSD1 mediates metabolic reprogramming by glucocorticoids during myogenic differentiation K Anan, S Hino, N Shimizu, A Sakamoto, K Nagaoka, R Takase, ... Nucleic acids research 46 (11), 5441-5454, 2018 | 40 | 2018 |
Chd2 regulates chromatin for proper gene expression toward differentiation in mouse embryonic stem cells Y Semba, A Harada, K Maehara, S Oki, C Meno, J Ueda, K Yamagata, ... Nucleic acids research 45 (15), 8758-8772, 2017 | 39 | 2017 |
Chd5 regulates MuERV‐L/MERVL expression in mouse embryonic stem cells via H3K27me3 modification and histone H3. 1/H3. 2 M Hayashi, K Maehara, A Harada, Y Semba, K Kudo, H Takahashi, S Oki, ... Journal of cellular biochemistry 117 (3), 780-792, 2016 | 37 | 2016 |
Hyperglycemia impairs left–right axis formation and thereby disturbs heart morphogenesis in mouse embryos M Hachisuga, S Oki, K Kitajima, S Ikuta, T Sumi, K Kato, N Wake, C Meno Proceedings of the National Academy of Sciences 112 (38), E5300-E5307, 2015 | 35 | 2015 |
Fate maps of ventral and dorsal pancreatic progenitor cells in early somite stage mouse embryos R Miki, T Yoshida, K Murata, S Oki, K Kume, S Kume Mechanisms of development 128 (11-12), 597-609, 2012 | 34 | 2012 |
High-depth spatial transcriptome analysis by photo-isolation chemistry M Honda, S Oki, R Kimura, A Harada, K Maehara, K Tanaka, C Meno, ... Nature communications 12 (1), 4416, 2021 | 31 | 2021 |
Age-associated decline of MondoA drives cellular senescence through impaired autophagy and mitochondrial homeostasis H Yamamoto-Imoto, S Minami, T Shioda, Y Yamashita, S Sakai, S Maeda, ... Cell Reports 38 (9), 2022 | 30 | 2022 |
Cross-ancestry genome-wide analysis of atrial fibrillation unveils disease biology and enables cardioembolic risk prediction K Miyazawa, K Ito, M Ito, Z Zou, M Kubota, S Nomura, H Matsunaga, ... Nature genetics 55 (2), 187-197, 2023 | 27 | 2023 |