Huaichun Wang
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Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
HC Wang, BQ Minh, E Susko, AJ Roger
Systematic biology 67 (2), 216-235, 2018
Rapid divergence of codon usage patterns within the rice genome
HC Wang, DA Hickey
BMC evolutionary biology 7 (1), 1-10, 2007
Evidence for strong selective constraint acting on the nucleotide composition of 16S ribosomal RNA genes
H Wang, DA Hickey
Nucleic Acids Research 30 (11), 2501-2507, 2002
A class frequency mixture model that adjusts for site-specific amino acid frequencies and improves inference of protein phylogeny
HC Wang, K Li, E Susko, AJ Roger
BMC evolutionary biology 8 (1), 1-13, 2008
On the correlation between genomic G+ C content and optimal growth temperature in prokaryotes: data quality and confounding factors
HC Wang, E Susko, AJ Roger
Biochemical and biophysical research communications 342 (3), 681-684, 2006
Testing for covarion-like evolution in protein sequences
HC Wang, M Spencer, E Susko, AJ Roger
Molecular biology and evolution 24 (1), 294-305, 2007
Mutational bias affects protein evolution in flowering plants
H Wang, GAC Singer, DA Hickey
Molecular Biology and Evolution 21 (1), 90-96, 2004
Analysis of codon usage patterns of bacterial genomes using the self-organizing map
HC Wang, J Badger, P Kearney, M Li
Molecular Biology and Evolution 18 (5), 792-800, 2001
Self‐organizing tree‐growing network for the classification of protein sequences
HC Wang, J Dopazo, LGDL Fraga, YP Zhu, JM Carazo
Protein Science 7 (12), 2613-2622, 1998
Thermal adaptation of the small subunit ribosomal RNA gene: a comparative study
HC Wang, X Xia, D Hickey
Journal of molecular evolution 63 (1), 120-126, 2006
Interplay of platelet contractility and elasticity of fibrin/erythrocytes in blood clot retraction
V Tutwiler, H Wang, RI Litvinov, JW Weisel, VB Shenoy
Biophysical journal 112 (4), 714-723, 2017
Self-organizing tree growing network for classifying amino acids.
HC Wang, J Dopazo, JM Carazo
Bioinformatics (Oxford, England) 14 (4), 376-377, 1998
Cytosine usage modulates the correlation between CDS length and CG content in prokaryotic genomes
X Xia, H Wang, Z Xie, M Carullo, H Huang, D Hickey
Molecular biology and evolution 23 (7), 1450-1454, 2006
An amino acid substitution-selection model adjusts residue fitness to improve phylogenetic estimation
HC Wang, E Susko, AJ Roger
Molecular biology and evolution 31 (4), 779-792, 2014
The relative importance of modeling site pattern heterogeneity versus partition-wise heterotachy in phylogenomic inference
HC Wang, E Susko, AJ Roger
Systematic biology 68 (6), 1003-1019, 2019
Topological estimation biases with covarion evolution
HC Wang, E Susko, M Spencer, AJ Roger
Journal of molecular evolution 66 (1), 50-60, 2008
PROCOV: maximum likelihood estimation of protein phylogeny under covarion models and site-specific covarion pattern analysis
HC Wang, E Susko, AJ Roger
BMC Evolutionary Biology 9 (1), 1-13, 2009
Superfamily expands
H Wang, J Wu, P Tang
Nature 337 (6207), 514-514, 1989
New phylogenetic venues opened by a novel implementation of the DNAml algorithm.
O Trelles, C Ceron, HC Wang, J Dopazo, JM Carazo
Bioinformatics (Oxford, England) 14 (6), 544-545, 1998
A new type of unsupervised growing neural network for biological sequence classification that adopts the topology of a phylogenetic tree
J Dopazo, H Wang, JM Carazo
International Work-Conference on Artificial Neural Networks, 932-941, 1997
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