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Yuval Elhanati
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Inferring processes underlying B-cell repertoire diversity
Y Elhanati, Z Sethna, Q Marcou, CG Callan Jr, T Mora, AM Walczak
Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015
2132015
OLGA: fast computation of generation probabilities of B-and T-cell receptor amino acid sequences and motifs
Z Sethna, Y Elhanati, CG Callan Jr, AM Walczak, T Mora
Bioinformatics 35 (17), 2974-2981, 2019
1702019
Quantifying selection in immune receptor repertoires
Y Elhanati, A Murugan, CG Callan, T Mora, AM Walczak
Proceedings of the National Academy of Sciences 111 (27), 9875-9880, 2014
1642014
Pharmacologic modulation of RNA splicing enhances anti-tumor immunity
SX Lu, E De Neef, JD Thomas, E Sabio, B Rousseau, M Gigoux, DA Knorr, ...
Cell 184 (15), 4032-4047. e31, 2021
1482021
Predicting the spectrum of TCR repertoire sharing with a data‐driven model of recombination
Y Elhanati, Z Sethna, CG Callan Jr, T Mora, AM Walczak
Immunological reviews 284 (1), 167-179, 2018
1172018
Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires
MV Pogorelyy, Y Elhanati, Q Marcou, AL Sycheva, EA Komech, ...
PLoS computational biology 13 (7), e1005572, 2017
982017
Neoantigen quality predicts immunoediting in survivors of pancreatic cancer
M Łuksza, ZM Sethna, LA Rojas, J Lihm, B Bravi, Y Elhanati, K Soares, ...
Nature 606 (7913), 389-395, 2022
942022
Genetic and environmental determinants of human TCR repertoire diversity
C Krishna, D Chowell, M Gönen, Y Elhanati, TA Chan
Immunity & Ageing 17, 1-7, 2020
522020
Population variability in the generation and selection of T-cell repertoires
Z Sethna, G Isacchini, T Dupic, T Mora, AM Walczak, Y Elhanati
PLOS Computational Biology 16 (12), e1008394, 2020
492020
repgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data
Y Elhanati, Q Marcou, T Mora, AM Walczak
Bioinformatics 32 (13), 1943-1951, 2016
432016
Insights into immune system development and function from mouse T-cell repertoires
Z Sethna, Y Elhanati, CR Dudgeon, CG Callan Jr, AJ Levine, T Mora, ...
Proceedings of the National Academy of Sciences 114 (9), 2253-2258, 2017
392017
A prospective, phase 1 trial of nivolumab, ipilimumab, and radiotherapy in patients with advanced melanoma
MA Postow, SJ Knox, DA Goldman, Y Elhanati, V Mavinkurve, P Wong, ...
Clinical Cancer Research 26 (13), 3193-3201, 2020
272020
Impaired humoral immunity is associated with prolonged COVID-19 despite robust CD8 T cell responses
O Lyudovyk, JY Kim, D Qualls, MA Hwee, YH Lin, SR Boutemine, ...
Cancer Cell 40 (7), 738-753. e5, 2022
222022
Langerhans dendritic cell vaccine bearing mRNA-encoded tumor antigens induces antimyeloma immunity after autotransplant
DJ Chung, S Sharma, M Rangesa, S DeWolf, Y Elhanati, K Perica, ...
Blood Advances 6 (5), 1547-1558, 2022
152022
Generative models of T-cell receptor sequences
G Isacchini, Z Sethna, Y Elhanati, A Nourmohammad, AM Walczak, ...
Physical Review E 101 (6), 062414, 2020
102020
Dynamic modeling of cooperative protein secretion in microorganism populations
Y Elhanati, S Schuster, N Brenner
Theoretical population biology 80 (1), 49-63, 2011
92011
Dynamics of the cell-cycle network under genome-rewiring perturbations
Y Katzir, Y Elhanati, I Averbukh, E Braun
Physical Biology 10 (6), 066001, 2013
72013
Evidence for shaping of light chain repertoire by structural selection
A Toledano, Y Elhanati, JIC Benichou, AM Walczak, T Mora, Y Louzoun
Frontiers in Immunology 9, 359712, 2018
52018
Tissue-specific features of the T cell repertoire after allogeneic hematopoietic cell transplantation in human and mouse
S DeWolf, Y Elhanati, K Nichols, NR Waters, CL Nguyen, JB Slingerland, ...
Science translational medicine 15 (706), eabq0476, 2023
42023
Metabolic variability in micro-populations
Y Elhanati, N Brenner
PloS one 7 (12), e52105, 2012
42012
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