Ilona Christy Unarta
Ilona Christy Unarta
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Elucidation of the dynamics of transcription elongation by RNA polymerase II using kinetic network models
L Zhang, F Pardo-Avila, IC Unarta, PPH Cheung, G Wang, D Wang, ...
Accounts of chemical research 49 (4), 687-694, 2016
Ca2+-induced rigidity change of the myosin VIIa IQ motif-single α helix lever arm extension
J Li, Y Chen, Y Deng, IC Unarta, Q Lu, X Huang, M Zhang
Structure 25 (4), 579-591. e4, 2017
Mechanism of DNA alkylation-induced transcriptional stalling, lesion bypass, and mutagenesis
L Xu, W Wang, J Wu, JH Shin, P Wang, IC Unarta, J Chong, Y Wang, ...
Proceedings of the National Academy of Sciences 114 (34), E7082-E7091, 2017
Molecular mechanisms of RNA polymerase II transcription elongation elucidated by kinetic network models
IC Unarta, L Zhu, CKM Tse, PPH Cheung, J Yu, X Huang
Current opinion in structural biology 49, 54-62, 2018
TAPS: A traveling-salesman based automated path searching method for functional conformational changes of biological macromolecules
L Zhu, FK Sheong, S Cao, S Liu, IC Unarta, X Huang
The Journal of chemical physics 150 (12), 124105, 2019
Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator cross-talk
M Bratkowski, IC Unarta, L Zhu, M Shubbar, X Huang, X Liu
Journal of Biological Chemistry 293 (5), 1651-1665, 2018
Elucidating molecular mechanisms of functional conformational changes of proteins via Markov state models
X Wang, IC Unarta, PPH Cheung, X Huang
Current Opinion in Structural Biology 67, 69-77, 2021
Role of bacterial RNA polymerase gate opening dynamics in DNA loading and antibiotics inhibition elucidated by quasi-Markov State Model
IC Unarta, S Cao, S Kubo, W Wang, PPH Cheung, X Gao, S Takada, ...
Proceedings of the National Academy of Sciences 118 (17), 2021
Recent Developments in Integral Equation Theory for Solvation to Treat Density Inhomogeneity at Solute–Solvent Interface
S Cao, KA Konovalov, IC Unarta, X Huang
Advanced Theory and Simulations 2 (7), 1900049, 2019
Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II
J Oh, J Shin, IC Unarta, W Wang, AW Feldman, RJ Karadeema, L Xu, J Xu, ...
Nature Chemical Biology, 1-9, 2021
Robust autoencoder gan for cryo-em image denoising
H Gu, IC Unarta, X Huang, Y Yao
arXiv preprint arXiv:2008.07307, 2020
Identifying Transcription Error-Enriched Genomic Loci Using Nuclear Run-on Circular-Sequencing Coupled with Background Error Modeling
PPH Cheung, B Jiang, GT Booth, TH Chong, IC Unarta, Y Wang, ...
Journal of molecular biology 432 (13), 3933-3949, 2020
EmPC-seq: Accurate RNA-sequencing and Bioinformatics Platform to Map RNA Polymerases and Remove Background Error
Y Wang, TH Chong, IC Unarta, X Xu, GD Suarez, J Wang, JT Lis, X Huang, ...
Bio-protocol 11 (4), e3921-e3921, 2021
Robust Denoising of Cryo-EM Images via β-GAN
H Gu, I Unarta, X Huang, Y Yao
Entropy of Stapled Peptide Inhibitors in Free State is the Major Contributor to the Improvement of Binding Affinity
IC Unarta, J Xu, Y Shang, CHP Cheung, R Zhu, X Chen, S Cao, ...
RSC Chemical Biology, 2021
An Efficient Method to Quantify Structural Distributions in Heterogeneous cryo-EM Datasets
H Gu, W Wang, IC Unarta, W Zeng, FK Sheong, P Cheung, S Liu, Y Yao, ...
bioRxiv, 2021
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