hong yu

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Co-authors

Carol FriedmanColumbia UniversityVerified email at columbia.edu
Tsendsuren MunkhdalaiResearch Scientist, GoogleVerified email at google.com
andrey rzhetskyProfessor, University of ChicagoVerified email at uchicago.edu
Shashank AgarwalUniversity of Wisconsin-MilwaukeeVerified email at dataxu.com
Abhyuday N JagannathaCICS, UMass AmherstVerified email at cs.umass.edu
W John WilburSenior scientist, National Center for Biotechnology InformationVerified email at ncbi.nlm.nih.gov
Yong-gang Cao （曹勇刚）AmazonVerified email at amazon.com
Balaji Polepalli RameshVP Data Science, NLP/Machine Learning Scientist at BlackRockVerified email at umassmed.edu
John LalorAssistant Professor, University of Notre DameVerified email at nd.edu
Michael KrauthammerUniversity of ZurichVerified email at uzh.ch
James CiminoUniversity of Alabama at BirminghamVerified email at uab.edu
George HripcsakColumbia UniversityVerified email at columbia.edu
Kevin Bretonnel CohenDirector, Biomedical Text Mining, U. Colorado School of MedicineVerified email at ucdenver.edu
Pablo DuboueIndependent ResearcherVerified email at famaf.unc.edu.ar
Dan JurafskyProfessor of Linguistics and Computer Science, Stanford UniversityVerified email at stanford.edu
Lamont AntieauUniversity of KentuckyVerified email at antieau.org
Pierre ZweigenbaumSenior Researcher, LIMSI, CNRS, Université Paris-Saclay, Orsay, FranceVerified email at limsi.fr
Steven BethardAssociate Professor, University of ArizonaVerified email at arizona.edu
Carl SableCooper UnionVerified email at cooper.edu
David KaufmanAssociate Professor of Medical Informatics SUNY Downstate Health Sciences UniversityVerified email at downstate.edu

hong yu

Professor, Depts Computer Science at Lowell and Amherst (Adjunct) and Medicine (Adjunct), UMass

Verified email at umassmed.edu - Homepage

biomedical informatics natural language processing


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Towards answering opinion questions: Separating facts from opinions and identifying the polarity of opinion sentences H Yu, V Hatzivassiloglou Proceedings of the 2003 conference on Empirical methods in natural language …, 2003	1493	2003
GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles C Friedman, P Kra, H Yu, M Krauthammer, A Rzhetsky ISMB (supplement of bioinformatics), 74-82, 2001	679	2001
Meta networks T Munkhdalai, H Yu International Conference on Machine Learning, 2554-2563, 2017	400	2017
Frontiers of biomedical text mining: current progress P Zweigenbaum, D Demner-Fushman, H Yu, KB Cohen Briefings in bioinformatics 8 (5), 358-375, 2007	365	2007
GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data A Rzhetsky, I Iossifov, T Koike, M Krauthammer, P Kra, M Morris, H Yu, ... Journal of biomedical informatics 37 (1), 43-53, 2004	339	2004
Automatic extraction of opinion propositions and their holders S Bethard, H Yu, A Thornton, V Hatzivassiloglou, D Jurafsky 2004 AAAI spring symposium on exploring attitude and affect in text 2224, 2004	263	2004
Bidirectional Recurrent Neural Networks for Medical Event Detection in Electronic Health Records AN Jagannatha, H Yu	227*	2016
AskHERMES: An online question answering system for complex clinical questions Y Cao, F Liu, P Simpson, L Antieau, A Bennett, JJ Cimino, J Ely, H Yu Journal of biomedical informatics 44 (2), 277-288, 2011	203	2011
Mapping abbreviations to full forms in biomedical articles H Yu, G Hripcsak, C Friedman Journal of the American Medical Informatics Association 9 (3), 262-272, 2002	182	2002
Structured prediction models for RNN based sequence labeling in medical text AN Jagannatha, H Yu EMNLP, 2016	143*	2016
Extracting synonymous gene and protein terms from biological literature H Yu, E Agichtein Bioinformatics 19 (suppl_1), i340-i349, 2003	135	2003
Neural semantic encoders T Munkhdalai, H Yu Proceedings of the conference. Association for Computational Linguistics …, 2017	116	2017
Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion S Agarwal, H Yu Bioinformatics 25 (23), 3174-3180, 2009	102	2009
Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians H Yu, M Lee, D Kaufman, J Ely, JA Osheroff, G Hripcsak, J Cimino Journal of biomedical informatics 40 (3), 236-251, 2007	100	2007
Beyond information retrieval—medical question answering M Lee, J Cimino, HR Zhu, C Sable, V Shanker, J Ely, H Yu AMIA annual symposium proceedings 2006, 469, 2006	97	2006
Automatic extraction of gene and protein synonyms from MEDLINE and journal articles. H Yu, V Hatzivassiloglou, C Friedman, A Rzhetsky, WJ Wilbur Proceedings of the AMIA Symposium, 919, 2002	96	2002
Neural tree indexers for text understanding T Munkhdalai, H Yu Proceedings of the conference. Association for Computational Linguistics …, 2017	95	2017
The biomedical discourse relation bank R Prasad, S McRoy, N Frid, A Joshi, H Yu BMC bioinformatics 12 (1), 1-18, 2011	91	2011
Biomedical negation scope detection with conditional random fields S Agarwal, H Yu Journal of the American medical informatics association 17 (6), 696-701, 2010	87	2010
Exploring text and image features to classify images in bioscience literature B Rafkind, M Lee, SF Chang, H Yu Proceedings of the HLT-NAACL BioNLP Workshop on Linking Natural Language and …, 2006	68	2006

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