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Francesca D Ciccarelli
Francesca D Ciccarelli
Other namesFrancesca Ciccarelli
Bart's Cancer Insitute & The Francis Crick Institute
Verified email at crick.ac.uk - Homepage
Title
Cited by
Cited by
Year
Toward automatic reconstruction of a highly resolved tree of life
FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork
science 311 (5765), 1283-1287, 2006
18492006
SMART 4.0: towards genomic data integration
I Letunic, RR Copley, S Schmidt, FD Ciccarelli, T Doerks, J Schultz, ...
Nucleic acids research 32 (suppl_1), D142-D144, 2004
12012004
Recent improvements to the SMART domain-based sequence annotation resource
I Letunic, L Goodstadt, NJ Dickens, T Doerks, J Schultz, R Mott, ...
Nucleic acids research 30 (1), 242-244, 2002
7892002
Age-related remodelling of oesophageal epithelia by mutated cancer drivers
A Yokoyama, N Kakiuchi, T Yoshizato, Y Nannya, H Suzuki, Y Takeuchi, ...
Nature 565 (7739), 312-317, 2019
5672019
Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma
R Shukla, KR Upton, M Muñoz-Lopez, DJ Gerhardt, ME Fisher, T Nguyen, ...
Cell 153 (1), 101-111, 2013
4362013
Nonsense‐mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways
D Gatfield, L Unterholzner, FD Ciccarelli, P Bork, E Izaurralde
The EMBO journal, 2003
3782003
Computational pan-genomics: status, promises and challenges
Briefings in bioinformatics 19 (1), 118-135, 2018
3452018
SPG20 is mutated in Troyer syndrome, an hereditary spastic paraplegia
H Patel, H Cross, C Proukakis, R Hershberger, P Bork, FD Ciccarelli, ...
Nature genetics 31 (4), 347-348, 2002
3242002
The Network of Cancer Genes (NCG): a comprehensive catalogue of known and candidate cancer genes from cancer sequencing screens
D Repana, J Nulsen, L Dressler, M Bortolomeazzi, SK Venkata, A Tourna, ...
Genome biology 20 (1), 1-12, 2019
2882019
Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster
J Rehwinkel, A Herold, K Gari, T Köcher, M Rode, FL Ciccarelli, M Wilm, ...
Nature structural & molecular biology 11 (6), 558-566, 2004
2582004
The landscape of selection in 551 esophageal adenocarcinomas defines genomic biomarkers for the clinic
AM Frankell, SG Jammula, X Li, G Contino, S Killcoyne, S Abbas, J Perner, ...
Nature genetics 51 (3), 506-516, 2019
2042019
Genome evolution reveals biochemical networks and functional modules
C Von Mering, EM Zdobnov, S Tsoka, FD Ciccarelli, JB Pereira-Leal, ...
Proceedings of the National Academy of Sciences 100 (26), 15428-15433, 2003
1992003
Family expansion and gene rearrangements contributed to the functional specialization of PRDM genes in vertebrates
I Fumasoni, N Meani, D Rambaldi, G Scafetta, M Alcalay, FD Ciccarelli
BMC evolutionary biology 7, 1-11, 2007
1842007
The identification of a conserved domain in both spartin and spastin, mutated in hereditary spastic paraplegia
FD Ciccarelli, C Proukakis, H Patel, H Cross, S Azam, MA Patton, P Bork, ...
Genomics 81 (4), 437-441, 2003
1782003
An analysis of IL-36 signature genes and individuals with IL1RL2 knockout mutations validates IL-36 as a psoriasis therapeutic target
SK Mahil, M Catapano, P Di Meglio, N Dand, H Ahlfors, IM Carr, CH Smith, ...
Science translational medicine 9 (411), eaan2514, 2017
1612017
NEAT: a domain duplicated in genes near the components of a putative Fe3+siderophore transporter from Gram-positive pathogenic bacteria
MA Andrade, FD Ciccarelli, C Perez-Iratxeta, P Bork
Genome biology 3, 1-5, 2002
1582002
COVID-19 in an international European liver transplant recipient cohort
C Becchetti, MF Zambelli, L Pasulo, MF Donato, F Invernizzi, O Detry, ...
Gut 69 (10), 1832-1840, 2020
1542020
FancyGene: dynamic visualization of gene structures and protein domain architectures on genomic loci
D Rambaldi, FD Ciccarelli
Bioinformatics 25 (17), 2281-2282, 2009
1322009
Generation and annotation of the DNA sequences of human chromosomes 2 and 4
LDW Hillier, TA Graves, RS Fulton, LA Fulton, KH Pepin, P Minx, ...
Nature 434 (7034), 724-731, 2005
1322005
Complex genomic rearrangements lead to novel primate gene function
FD Ciccarelli, C von Mering, M Suyama, ED Harrington, E Izaurralde, ...
Genome research 15 (3), 343-351, 2005
1302005
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