| Multi-petascale highly efficient parallel supercomputer S Asaad, RE Bellofatto, MA Blocksome, MA Blumrich, P Boyle, ... US Patent 9,081,501, 2015 | 559 | 2015 |
| Overview of the IBM Blue Gene/P project G Almasi, S Asaad, RE Bellofatto, HR Bickford, MA Blumrich, B Brezzo, ... IBM Journal of Research and Development, 2008 | 219 | 2008 |
| The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes SMD Seaver, F Liu, Q Zhang, J Jeffryes, JP Faria, JN Edirisinghe, ... Nucleic acids research 49 (D1), D575-D588, 2021 | 193 | 2021 |
| Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers VL Hale, P Jeraldo, J Chen, M Mundy, J Yao, S Priya, G Keeney, K Lyke, ... Genome medicine 10, 1-13, 2018 | 115 | 2018 |
| Inferring metabolic mechanisms of interaction within a defined gut microbiota GL Medlock, MA Carey, DG McDuffie, MB Mundy, N Giallourou, ... Cell systems 7 (3), 245-257. e7, 2018 | 101 | 2018 |
| Designing a highly-scalable operating system: The Blue Gene/L story J Moreira, M Brutman, J Castanos, T Engelsiepen, M Giampapa, ... Proceedings of the 2006 ACM/IEEE conference on Supercomputing, 118-es, 2006 | 94 | 2006 |
| Error Recovery During Execution Of An Application On A Parallel Computer TM Gooding, PJ McCarthy, MB Mundy US Patent App. 12/174,312, 2010 | 83 | 2010 |
| Multi-petascale highly efficient parallel supercomputer S Asaad, RE Bellofatto, MA Blocksome, MA Blumrich, P Boyle, ... US Patent 9,971,713, 2018 | 81 | 2018 |
| Likelihood-Based Gene Annotations for Gap Filling and Quality Assessment in Genome-Scale Metabolic Models MN Benedict, MB Mundy, CS Henry, N Chia, ND Price PLOS Computational Biology, 2014 | 79 | 2014 |
| MMinte: an application for predicting metabolic interactions among the microbial species in a community H Mendes-Soares, M Mundy, LM Soares, N Chia BMC bioinformatics 17, 1-10, 2016 | 74 | 2016 |
| Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer VL Hale, P Jeraldo, M Mundy, J Yao, G Keeney, N Scott, EH Cheek, ... Methods 149, 59-68, 2018 | 72 | 2018 |
| Blue Gene/L programming and operating environment JE Moreira, G Almási, C Archer, R Bellofatto, P Bergner, JR Brunheroto, ... IBM journal of Research and Development 49 (2.3), 367-376, 2005 | 68 | 2005 |
| Remote Direct Memory Access ('RDMA') In A Parallel Computer ME Aho, TM Gooding, MB Mundy, AT Tauferner US Patent App. 13/167,950, 2012 | 34 | 2012 |
| Remote direct memory access (‘RDMA’) in a parallel computer ME Aho, TM Gooding, MB Mundy, AT Tauferner US Patent 8,874,681, 2014 | 33 | 2014 |
| Messaging in a parallel computer using remote direct memory access (‘RDMA’) ME Aho, TM Gooding, MB Mundy, AT Tauferner US Patent 8,490,113, 2013 | 23 | 2013 |
| Re-executing launcher program upon termination of launched programs in MIMD mode booted SIMD partitions TA Inglett, PJ McCarthy, A Peters, TA Budnik, MB Mundy, GG Stewart US Patent 7,979,674, 2011 | 23 | 2011 |
| Collectively loading an application in a parallel computer ME Aho, JE Attinella, TM Gooding, SJ Miller, MB Mundy US Patent 9,229,782, 2016 | 19 | 2016 |
| The Blue Gene/L supercomputer: A hardware and software story JE Moreira, V Salapura, G Almasi, C Archer, R Bellofatto, P Bergner, ... International Journal of Parallel Programming 35, 181-206, 2007 | 18 | 2007 |
| Design and implementation of a one-sided communication interface for the IBM eServer Blue Gene® supercomputer M Blocksome, C Archer, T Inglett, P McCarthy, M Mundy, J Ratterman, ... Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, 120-es, 2006 | 18 | 2006 |
| Asynchronous task dispatch for high throughput computing for the eServer IBM Blue Gene® Supercomputer A Peters, A King, T Budnik, P McCarthy, P Michaud, M Mundy, J Sexton, ... 2008 IEEE International Symposium on Parallel and Distributed Processing, 1-7, 2008 | 16 | 2008 |
