Inferring causal molecular networks: empirical assessment through a community-based effort SM Hill, LM Heiser, T Cokelaer, M Unger, NK Nesser, DE Carlin, Y Zhang, ... Nature methods 13 (4), 310-318, 2016 | 237 | 2016 |
Cardiolipin interactions with proteins J Planas-Iglesias, H Dwarakanath, D Mohammadyani, N Yanamala, ... Biophysical journal 109 (6), 1282-1294, 2015 | 144 | 2015 |
The brown adipocyte protein CIDEA promotes lipid droplet fusion via a phosphatidic acid-binding amphipathic helix D Barneda, J Planas-Iglesias, ML Gaspar, D Mohammadyani, ... Elife 4, e07485, 2015 | 139 | 2015 |
Known unknowns of cardiolipin signaling: the best is yet to come JJ Maguire, YY Tyurina, D Mohammadyani, AA Kapralov, ... Biochimica et Biophysica Acta (BBA)-Molecular and Cell Biology of Lipids …, 2017 | 129 | 2017 |
Biana: a software framework for compiling biological interactions and analyzing networks J Garcia-Garcia, E Guney, R Aragues, J Planas-Iglesias, B Oliva BMC bioinformatics 11, 1-12, 2010 | 102 | 2010 |
Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis SK Sieberts, F Zhu, J García-García, E Stahl, A Pratap, G Pandey, ... Nature communications 7 (1), 12460, 2016 | 92 | 2016 |
Engineering the protein dynamics of an ancestral luciferase A Schenkmayerova, GP Pinto, M Toul, M Marek, L Hernychova, ... Nature Communications 12 (1), 3616, 2021 | 64 | 2021 |
Computational design of enzymes for biotechnological applications J Planas-Iglesias, SM Marques, GP Pinto, M Musil, J Stourac, ... Biotechnology Advances 47, 107696, 2021 | 62 | 2021 |
iLoops: a protein–protein interaction prediction server based on structural features J Planas-Iglesias, MA Marin-Lopez, J Bonet, J Garcia-Garcia, B Oliva Bioinformatics 29 (18), 2360-2362, 2013 | 54 | 2013 |
Understanding protein–protein interactions using local structural features J Planas-Iglesias, J Bonet, J Garcia-Garcia, MA Marin-Lopez, E Feliu, ... Journal of molecular biology 425 (7), 1210-1224, 2013 | 53 | 2013 |
ArchDB 2014: structural classification of loops in proteins J Bonet, J Planas-Iglesias, J Garcia-Garcia, MA Marín-López, ... Nucleic acids research 42 (D1), D315-D319, 2014 | 46 | 2014 |
Web-based tools for computational enzyme design SM Marques, J Planas-Iglesias, J Damborsky Current Opinion in Structural Biology 69, 19-34, 2021 | 42 | 2021 |
Structural characterization of cardiolipin-driven activation of cytochrome c into a peroxidase and membrane perturbation D Mohammadyani, N Yanamala, AK Samhan-Arias, AA Kapralov, ... Biochimica et Biophysica Acta (BBA)-Biomembranes 1860 (5), 1057-1068, 2018 | 40 | 2018 |
Mitochondrial redox opto-lipidomics reveals mono-oxygenated cardiolipins as pro-apoptotic death signals G Mao, F Qu, CM St. Croix, YY Tyurina, J Planas-Iglesias, J Jiang, ... ACS chemical biology 11 (2), 530-540, 2016 | 32 | 2016 |
Networks of Protein Protein Interactions: From Uncertainty to Molecular Details J Garcia‐Garcia, J Bonet, E Guney, O Fornes, J Planas, B Oliva Molecular Informatics 31 (5), 342-362, 2012 | 32 | 2012 |
Comparative modelling of protein structure and its impact on microbial cell factories NB Centeno, J Planas-Iglesias, B Oliva Microbial Cell Factories 4 (1), 20, 2005 | 30 | 2005 |
Tools for computational design and high-throughput screening of therapeutic enzymes M Vasina, J Velecký, J Planas-Iglesias, SM Marques, J Skarupova, ... Advanced Drug Delivery Reviews 183, 114143, 2022 | 23 | 2022 |
Frag’r’Us: knowledge-based sampling of protein backbone conformations for de novo structure-based protein design J Bonet, J Segura, J Planas-Iglesias, B Oliva, N Fernandez-Fuentes Bioinformatics 30 (13), 1935-1936, 2014 | 21 | 2014 |
Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 L Chrast, K Tratsiak, J Planas-Iglesias, L Daniel, T Prudnikova, ... Microorganisms 7 (11), 498, 2019 | 19 | 2019 |
Allosteric Communications between Domains Modulate the Activity of Matrix Metalloprotease-1. L Kumar, A Nash, C Harms, J Planas-Iglesias, D Wright, ... Biophysical Journal 119 (2), 360-374, 2020 | 17 | 2020 |