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Jin-Dong Kim
Jin-Dong Kim
Associate Professor of Database Center for Life Science
Verified email at dbcls.rois.ac.jp
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Year
GENIA corpus—a semantically annotated corpus for bio-textmining
JD Kim, T Ohta, Y Tateisi, J Tsujii
Bioinformatics 19 (suppl_1), i180-i182, 2003
15722003
Introduction to the bio-entity recognition task at JNLPBA
N Collier, T Ohta, Y Tsuruoka, Y Tateisi, JD Kim
Proceedings of the International Joint Workshop on Natural Language …, 2004
8292004
Overview of BioNLP’09 shared task on event extraction
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Proceedings of the BioNLP 2009 workshop companion volume for shared task, 1-9, 2009
8212009
Developing a robust part-of-speech tagger for biomedical text
Y Tsuruoka, Y Tateishi, JD Kim, T Ohta, J McNaught, S Ananiadou, ...
Advances in Informatics: 10th Panhellenic Conference on Informatics, PCI …, 2005
6212005
Corpus annotation for mining biomedical events from literature
JD Kim, T Ohta, J Tsujii
BMC bioinformatics 9, 1-25, 2008
4932008
The GENIA corpus: An annotated research abstract corpus in molecular biology domain
T Ohta, Y Tateisi, JD Kim, H Mima, J Tsujii
Proceedings of the human language technology conference, 73-77, 2002
4292002
Overview of BioNLP shared task 2013
C Nédellec, R Bossy, JD Kim, JJ Kim, T Ohta, S Pyysalo, P Zweigenbaum
Proceedings of the BioNLP shared task 2013 workshop, 1-7, 2013
2912013
Event extraction with complex event classification using rich features
M Miwa, R Sætre, JD Kim, J Tsujii
Journal of bioinformatics and computational biology 8 (01), 131-146, 2010
2282010
Extraction of gene-disease relations from Medline using domain dictionaries and machine learning
HW Chun, Y Tsuruoka, JD Kim, R Shiba, N Nagata, T Hishiki, J Tsujii
Biocomputing 2006, 4-15, 2006
2232006
Overview of genia event task in bionlp shared task 2011
JD Kim, Y Wang, T Takagi, A Yonezawa
Proceedings of BioNLP shared task 2011 workshop, 7-15, 2011
1842011
The genia event extraction shared task, 2013 edition-overview
JD Kim, Y Wang, Y Yasunori
Proceedings of the BioNLP Shared Task 2013 Workshop, 8-15, 2013
1692013
The genia event and protein coreference tasks of the BioNLP shared task 2011
JD Kim, N Nguyen, Y Wang, J Tsujii, T Takagi, A Yonezawa
BMC bioinformatics 13, 1-12, 2012
1132012
New challenges for text mining: mapping between text and manually curated pathways
K Oda, JD Kim, T Ohta, D Okanohara, T Matsuzaki, Y Tateisi, J Tsujii
BMC bioinformatics 9, 1-14, 2008
812008
EXTRACTING BIO‐MOLECULAR EVENTS FROM LITERATURE—THE BIONLP’09 SHARED TASK
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Computational Intelligence 27 (4), 513-540, 2011
702011
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains
T Katayama, MD Wilkinson, KF Aoki-Kinoshita, S Kawashima, ...
Journal of biomedical semantics 5, 1-13, 2014
692014
PubAnnotation-a persistent and sharable corpus and annotation repository
JD Kim, Y Wang
BioNLP: Proceedings of the 2012 Workshop on Biomedical Natural Language …, 2012
652012
BioNLP shared task 2011: Supporting resources
P Stenetorp, G Topić, S Pyysalo, T Ohta, JD Kim, J Tsujii
Proceedings of BioNLP shared task 2011 workshop, 112-120, 2011
572011
Introducing glycomics data into the Semantic Web
KF Aoki-Kinoshita, J Bolleman, MP Campbell, S Kawano, JD Kim, ...
Journal of Biomedical Semantics 4, 1-7, 2013
542013
An intelligent search engine and GUI-based efficient MEDLINE search tool based on deep syntactic parsing
T Ohta, Y Miyao, T Ninomiya, Y Tsuruoka, A Yakushiji, K Masuda, ...
Proceedings of the COLING/ACL 2006 Interactive Presentation Sessions, 17-20, 2006
502006
Natural language query processing for SPARQL generation: A prototype system for SNOMED CT
JD Kim, KB Cohen
Proceedings of biolink 32, 38, 2013
492013
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Articles 1–20