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Marat Kazanov
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The repertoire of mutational signatures in human cancer
LB Alexandrov, J Kim, NJ Haradhvala, MN Huang, AW Tian Ng, Y Wu, ...
Nature 578 (7793), 94-101, 2020
24832020
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
15532020
The evolutionary history of 2,658 cancers
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
Nature 578 (7793), 122-128, 2020
8772020
Patterns of somatic structural variation in human cancer genomes
Y Li, ND Roberts, JA Wala, O Shapira, SE Schumacher, K Kumar, ...
Nature 578 (7793), 112-121, 2020
7102020
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing
I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ...
Nature genetics 52 (3), 331-341, 2020
5542020
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...
Nature 578 (7793), 102-111, 2020
5112020
RegPrecise 3.0–a resource for genome-scale exploration of transcriptional regulation in bacteria
PS Novichkov, AE Kazakov, DA Ravcheev, SA Leyn, GY Kovaleva, ...
BMC genomics 14, 1-12, 2013
3802013
The landscape of viral associations in human cancers
M Zapatka, I Borozan, DS Brewer, M Iskar, A Grundhoff, M Alawi, N Desai, ...
Nature genetics 52 (3), 320-330, 2020
3352020
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition
B Rodriguez-Martin, EG Alvarez, A Baez-Ortega, J Zamora, F Supek, ...
Nature genetics 52 (3), 306-319, 2020
3242020
Comprehensive molecular characterization of mitochondrial genomes in human cancers
Y Yuan, YS Ju, Y Kim, J Li, Y Wang, CJ Yoon, Y Yang, I Martincorena, ...
Nature genetics 52 (3), 342-352, 2020
3082020
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 2674, 2019
2802019
Predicting human olfactory perception from chemical features of odor molecules
A Keller, RC Gerkin, Y Guan, A Dhurandhar, G Turu, B Szalai, ...
Science 355 (6327), 820-826, 2017
2792017
Genomic basis for RNA alterations in cancer
PCAWG Transcriptome Core Group Calabrese Claudia 2 Davidson Natalie R. 3 4 5 ...
Nature 578 (7793), 129-136, 2020
2782020
Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer
KC Akdemir, VT Le, S Chandran, Y Li, RG Verhaak, R Beroukhim, ...
Nature genetics 52 (3), 294-305, 2020
2052020
Evaluation and comparison of current fetal ultrasound image segmentation methods for biometric measurements: a grand challenge
S Rueda, S Fathima, CL Knight, M Yaqub, AT Papageorghiou, ...
IEEE Transactions on medical imaging 33 (4), 797-813, 2013
1892013
A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
W Jiao, G Atwal, P Polak, R Karlic, E Cuppen, A Danyi, J de Ridder, ...
Nature communications 11 (1), 728, 2020
1812020
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis
J Carlevaro-Fita, A Lanzós, L Feuerbach, C Hong, D Mas-Ponte, ...
Communications biology 3 (1), 56, 2020
1652020
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open …
J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ...
The Lancet Oncology 18 (1), 132-142, 2017
1612017
Functional specialization in proline biosynthesis of melanoma
J De Ingeniis, B Ratnikov, AD Richardson, DA Scott, P Aza-Blanc, SK De, ...
Public Library of Science 7 (9), e45190, 2012
1472012
Evolution of pan-genomes of Escherichia coli, Shigella spp., and Salmonella enterica
EN Gordienko, MD Kazanov, MS Gelfand
Journal of bacteriology 195 (12), 2786-2792, 2013
1412013
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