Meghana Kshirsagar
Meghana Kshirsagar
Microsoft, AI for Good
Verified email at - Homepage
Cited by
Cited by
Keyword search on external memory data graphs
BB Dalvi, M Kshirsagar, S Sudarshan
Proceedings of the VLDB Endowment 1 (1), 1189-1204, 2008
Multitask learning for host–pathogen protein interactions
M Kshirsagar, J Carbonell, J Klein-Seetharaman
Bioinformatics 29 (13), i217-i226, 2013
Frame-semantic role labeling with heterogeneous annotations
M Kshirsagar, S Thomson, N Schneider, J Carbonell, NA Smith, C Dyer
Association of Computational Linguistics, 2015
Comparing recurrent convolutional neural networks for large scale bird species classification
G Gupta, M Kshirsagar, M Zhong, S Gholami, JL Ferres
Scientific reports 11 (1), 17085, 2021
Predicting the locations of cryptic pockets from single protein structures using the PocketMiner graph neural network
A Meller, MD Ward, JH Borowsky, JM Lotthammer, M Kshirsagar, ...
Biophysical journal 122 (3), 445a, 2023
An epigenetic barrier sets the timing of human neuronal maturation
G Ciceri, A Baggiolini, HS Cho, M Kshirsagar, S Benito-Kwiecinski, ...
Nature 626 (8000), 881-890, 2024
Techniques to cope with missing data in host–pathogen protein interaction prediction
M Kshirsagar, J Carbonell, J Klein-Seetharaman
Bioinformatics 28 (18), i466-i472, 2012
BindSpace decodes transcription factor binding signals by large-scale sequence embedding
H Yuan, M Kshirsagar, L Zamparo, Y Lu, CS Leslie
Nature methods 16 (9), 858-861, 2019
Techniques for transferring host-pathogen protein interactions knowledge to new tasks
M Kshirsagar, S Schleker, J Carbonell, J Klein-Seetharaman
Frontiers in Microbiology, 63, 2015
Comparing human–Salmonella with plant–Salmonella protein–protein interaction predictions
S Schleker, M Kshirsagar, J Klein-Seetharaman
Frontiers in Microbiology, 76, 2015
Virus interactions with human signal transduction pathways
Z Zhao, J Xia, O Tastan, I Singh, M Kshirsagar, J Carbonell, ...
International journal of computational biology and drug design 4 (1), 83-105, 2011
Becoming good at AI for good
M Kshirsagar, C Robinson, S Yang, S Gholami, I Klyuzhin, S Mukherjee, ...
Proceedings of the 2021 AAAI/ACM Conference on AI, Ethics, and Society, 664-673, 2021
High precision web extraction using site knowledge
M Kshirsagar, R Rastogi, SB Satpal, SH Sengamedu, V Satuluri
US Patent App. 12/416,381, 2010
Multitask matrix completion for learning protein interactions across diseases
M Kshirsagar, JG Carbonell, J Klein-Seetharaman, K Murugesan
International Conference on Research in Computational Molecular Biology …, 2016
Multisource transfer learning for host-pathogen protein interaction prediction in unlabeled tasks
M Kshirsagar, J Carbonell, J Klein-Seetharaman
Machine learning for computational biology workshop, Neural Information …, 2013
Automatic extraction using machine learning based robust structural extractors
AS Kirpal, SB Satpal, M Kshirsagar, SH Sengamedu
US Patent App. 12/395,586, 2010
Estimating vaccine-preventable COVID-19 deaths under counterfactual vaccination scenarios in the United States
M Zhong, M Kshirsagar, R Johnston, R Dodhia, T Glazer, A Kim, ...
medRxiv, 2022.05. 19.22275310, 2022
Identifying human interactors of SARS-CoV-2 proteins and drug targets for COVID-19 using network-based label propagation
JN Law, K Akers, N Tasnina, CM Della Santina, M Kshirsagar, ...
Virginia Tech, 2020
Democratizing protein language models with parameter-efficient fine-tuning
S Sledzieski, M Kshirsagar, M Baek, R Dodhia, J Lavista Ferres, B Berger
Proceedings of the National Academy of Sciences 121 (26), e2405840121, 2024
BindVAE: Dirichlet variational autoencoders for de novo motif discovery from accessible chromatin
M Kshirsagar, H Yuan, JL Ferres, C Leslie
Genome biology 23 (1), 174, 2022
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