Yong-Xin Liu (刘永鑫)
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Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
NRT1. 1B is associated with root microbiota composition and nitrogen use in field-grown rice
J Zhang, YX Liu, N Zhang, B Hu, T Jin, H Xu, Y Qin, P Yan, X Zhang, ...
Nature biotechnology 37 (6), 676-684, 2019
A specialized metabolic network selectively modulates Arabidopsis root microbiota
AC Huang, T Jiang, YX Liu, YC Bai, J Reed, B Qu, A Goossens, ...
Science 364 (6440), 2019
Expression of the nitrate transporter gene OsNRT1. 1A/OsNPF6. 3 confers high yield and early maturation in rice
W Wang, B Hu, D Yuan, Y Liu, R Che, Y Hu, S Ou, YX Liu, Z Zhang, ...
The Plant Cell 30 (3), 638-651, 2018
Root microbiota shift in rice correlates with resident time in the field and developmental stage
J Zhang, N Zhang, YX Liu, X Zhang, B Hu, Y Qin, H Xu, H Wang, X Guo, ...
Science China Life Sciences 61 (6), 613-621, 2018
N2O and NO emission from a biological aerated filter treating coking wastewater: Main source and microbial community
M Zheng, N Zhou, S Liu, C Dang, YX Liu, S He, Y Zhao, W Liu, X Wang
Journal of Cleaner Production 213, 365-374, 2019
Reductionist synthetic community approaches in root microbiome research
YX Liu, Y Qin, Y Bai
Current opinion in microbiology 49, 97-102, 2019
Endogenous small RNA clusters in plants
YX Liu, M Wang, XJ Wang
Genomics, proteomics & bioinformatics 12 (2), 64-71, 2014
Recently duplicated sesterterpene (C25) gene clusters in Arabidopsis thaliana modulate root microbiota
Q Chen, T Jiang, YX Liu, H Liu, T Zhao, Z Liu, X Gan, A Hallab, X Wang, ...
Science China Life Sciences 62 (7), 947-958, 2019
In silico detection of novel microRNAs genes in soybean genome
YX Liu, W Chang, Y Han, Q Zou, M Guo, W Li
Agricultural Sciences in China 10 (9), 1336-1345, 2011
A practical guide to amplicon and metagenomic analysis of microbiome data
YX Liu, Y Qin, T Chen, M Lu, X Qian, X Guo, Y Bai
Host-associated quantitative abundance profiling reveals the microbial load variation of root microbiome
X Guo, X Zhang, Y Qin, YX Liu, J Zhang, N Zhang, K Wu, B Qu, Z He, ...
Plant communications 1 (1), 100003, 2020
Genomic analysis of microRNA promoters and their cis-acting elements in soybean
YX Liu, YP Han, W Chang, Q Zou, MZ Guo, WB Li
Agricultural Sciences in China 9 (11), 1561-1570, 2010
Dynamic chromatin changes associated with de novo centromere formation in maize euchromatin
H Su, Y Liu, YX Liu, Z Lv, H Li, S Xie, Z Gao, J Pang, XJ Wang, J Lai, ...
The Plant Journal 88 (5), 854-866, 2016
An Arabidopsis secondary metabolite directly targets expression of the bacterial type III secretion system to inhibit bacterial virulence
W Wang, J Yang, J Zhang, YX Liu, C Tian, B Qu, C Gao, P Xin, S Cheng, ...
Cell host & microbe 27 (4), 601-613. e7, 2020
Methods and applications for microbiome data analysis
Y Liu, Y Qin, XX Guo, Y Bai
Yi Chuan= Hereditas 41 (9), 845-862, 2019
刘永鑫, 秦媛, 郭晓璇, 白洋
遗传 41 (9), 845-862, 2019
Gut microbiota in children with juvenile idiopathic arthritis: characteristics, biomarker identification, and usefulness in clinical prediction
X Qian, YX Liu, X Ye, W Zheng, S Lv, M Mo, J Lin, W Wang, W Wang, ...
BMC genomics 21, 1-13, 2020
MicroRNA primary transcripts and promoter elements analysis in soybean (Glycine max L. Merril.)
J Li, YX Liu, Y Han, Y Li, M Guo, W Li
Journal of Integrative Agriculture 12 (9), 1522-1529, 2013
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Articles 1–20