Alistair Boettiger
Spatially resolved, highly multiplexed RNA profiling in single cells
KH Chen, AN Boettiger, JR Moffitt, S Wang, X Zhuang
Science 348 (6233), 2015
Super-resolution imaging reveals distinct chromatin folding for different epigenetic states
AN Boettiger, B Bintu, JR Moffitt, S Wang, BJ Beliveau, G Fudenberg, ...
Nature 529 (7586), 418-422, 2016
Shadow enhancers foster robustness of Drosophila gastrulation
MW Perry, AN Boettiger, JP Bothma, M Levine
Current Biology 20 (17), 1562-1567, 2010
Synchronous and stochastic patterns of gene activation in the Drosophila embryo
AN Boettiger, M Levine
Science 325 (5939), 471-473, 2009
Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells
B Bintu, LJ Mateo, JH Su, NA Sinnott-Armstrong, M Parker, S Kinrot, ...
Science 362 (6413), 2018
Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes
BJ Beliveau, AN Boettiger, MS Avendaño, R Jungmann, RB McCole, ...
Nature communications 6 (1), 1-13, 2015
Multiple enhancers ensure precision of gap gene-expression patterns in the Drosophila embryo
MW Perry, AN Boettiger, M Levine
Proceedings of the National Academy of Sciences 108 (33), 13570-13575, 2011
Role of boundary conditions in an experimental model of epithelial wound healing
DL Nikolic, AN Boettiger, D Bar-Sagi, JD Carbeck, SY Shvartsman
American journal of physiology-cell physiology 291 (1), C68-C75, 2006
Chromatin topology is coupled to Polycomb group protein subnuclear organization
AH Wani, AN Boettiger, P Schorderet, A Ergun, C Münger, RI Sadreyev, ...
Nature communications 7 (1), 1-13, 2016
Nuclear trapping shapes the terminal gradient in the Drosophila embryo
M Coppey, AN Boettiger, AM Berezhkovskii, SY Shvartsman
Current Biology 18 (12), 915-919, 2008
Modeling the bicoid gradient: diffusion and reversible nuclear trapping of a stable protein
M Coppey, AM Berezhkovskii, Y Kim, AN Boettiger, SY Shvartsman
Developmental biology 312 (2), 623-630, 2007
The neural origins of shell structure and pattern in aquatic mollusks
A Boettiger, B Ermentrout, G Oster
Proceedings of the National Academy of Sciences 106 (16), 6837-6842, 2009
Spatial organization shapes the turnover of a bacterial transcriptome
JR Moffitt, S Pandey, AN Boettiger, S Wang, X Zhuang
Elife 5, e13065, 2016
Visualizing DNA folding and RNA in embryos at single-cell resolution
LJ Mateo, SE Murphy, A Hafner, IS Cinquini, CA Walker, AN Boettiger
Nature 568 (7750), 49-54, 2019
Atlas of subcellular RNA localization revealed by APEX-seq
FM Fazal, S Han, KR Parker, P Kaewsapsak, J Xu, AN Boettiger, ...
Cell 178 (2), 473-490. e26, 2019
Rapid transcription fosters coordinate snail expression in the Drosophila embryo
AN Boettiger, M Levine
Cell reports 3 (1), 8-15, 2013
Inferring ecological and behavioral drivers of African elephant movement using a linear filtering approach
AN Boettiger, G Wittemyer, R Starfield, F Volrath, I Douglas-Hamilton, ...
Ecology 92 (8), 1648-1657, 2011
In situ super-resolution imaging of genomic DNA with OligoSTORM and OligoDNA-PAINT
BJ Beliveau, AN Boettiger, G Nir, B Bintu, P Yin, X Zhuang
Super-Resolution Microscopy, 231-252, 2017
Transcriptional regulation: effects of promoter proximal pausing on speed, synchrony and reliability
AN Boettiger, PL Ralph, SN Evans
PLoS Comput Biol 7 (5), e1001136, 2011
Morphogen gradients: limits to signaling or limits to measurement?
JP Bothma, M Levine, A Boettiger
Current Biology 20 (5), R232-R234, 2010
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