| High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries G Mullokandov, A Baccarini, A Ruzo, AD Jayaprakash, N Tung, ... Nature methods 9 (8), 840-846, 2012 | 416 | 2012 |
| Kinetic analysis reveals the fate of a microRNA following target regulation in mammalian cells A Baccarini, H Chauhan, TJ Gardner, AD Jayaprakash, ... Current biology 21 (5), 369-376, 2011 | 303 | 2011 |
| Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing AD Jayaprakash, O Jabado, BD Brown, R Sachidanandam Nucleic acids research 39 (21), e141-e141, 2011 | 285 | 2011 |
| Clonal deletion of tumor-specific T cells by interferon-γ confers therapeutic resistance to combination immune checkpoint blockade CCS Pai, JT Huang, X Lu, DM Simons, C Park, A Chang, W Tamaki, E Liu, ... Immunity 50 (2), 477-492. e8, 2019 | 110 | 2019 |
| Stable heteroplasmy at the single-cell level is facilitated by intercellular exchange of mtDNA AD Jayaprakash, EK Benson, S Gone, R Liang, J Shim, L Lambertini, ... Nucleic acids research 43 (4), 2177-2187, 2015 | 82 | 2015 |
| CRISPR-barcoding for intratumor genetic heterogeneity modeling and functional analysis of oncogenic driver mutations A Guernet, SK Mungamuri, D Cartier, R Sachidanandam, A Jayaprakash, ... Molecular cell 63 (3), 526-538, 2016 | 68 | 2016 |
| Tbx3 controls Dppa3 levels and exit from pluripotency toward mesoderm A Waghray, N Saiz, AD Jayaprakash, AG Freire, D Papatsenko, ... Stem cell reports 5 (1), 97-110, 2015 | 64 | 2015 |
| YES1 amplification is a mechanism of acquired resistance to EGFR inhibitors identified by transposon mutagenesis and clinical genomics PD Fan, G Narzisi, AD Jayaprakash, E Venturini, N Robine, P Smibert, ... Proceedings of the National Academy of Sciences 115 (26), E6030-E6038, 2018 | 54 | 2018 |
| Diet modifies colonic microbiota and CD4+ T-cell repertoire to induce flares of colitis in mice with myeloid-cell expression of interleukin 23 L Chen, Z He, AC Iuga, SN Martins Filho, JJ Faith, JC Clemente, ... Gastroenterology 155 (4), 1177-1191. e16, 2018 | 38 | 2018 |
| Accessible LAMP-enabled rapid test (ALERT) for detecting SARS-CoV-2 A Bektaş, MF Covington, G Aidelberg, A Arce, T Matute, I Núñez, J Walsh, ... Viruses 13 (5), 742, 2021 | 27 | 2021 |
| Embryonic stem cells: from markers to market KD Deb, AD Jayaprakash, V Sharma, S Totey Rejuvenation research 11 (1), 19-37, 2008 | 20 | 2008 |
| Isolation and characterization of a novel gammaherpesvirus from a microbat cell line RS Shabman, S Shrivastava, T Tsibane, O Attie, A Jayaprakash, CE Mire, ... Msphere 1 (1), 10.1128/msphere. 00070-15, 2016 | 18 | 2016 |
| Next generation sequencing of the pig αβ TCR repertoire identifies the porcine invariant NKT cell receptor G Yang, BL Artiaga, CL Lomelino, AD Jayaprakash, R Sachidanandam, ... The Journal of Immunology 202 (7), 1981-1991, 2019 | 17 | 2019 |
| Impact of suboptimal APOBEC3G neutralization on the emergence of HIV drug resistance in humanized mice MM Hernandez, A Fahrny, A Jayaprakash, G Gers-Huber, M Dillon-White, ... Journal of virology 94 (5), 10.1128/jvi. 01543-19, 2020 | 14 | 2020 |
| Transposon mutagenesis in Mycobacterium kansasii links a small RNA gene to colony morphology and biofilm formation and identifies 9,885 intragenic insertions … WC Budell, GA Germain, N Janisch, Z McKie‐Krisberg, AD Jayaprakash, ... Microbiologyopen 9 (4), e988, 2020 | 11 | 2020 |
| MiST: a new approach to variant detection in deep sequencing datasets S Subramanian, V Di Pierro, H Shah, AD Jayaprakash, I Weisberger, ... Nucleic acids research 41 (16), e154-e154, 2013 | 10 | 2013 |
| YES1 amplification as a mechanism of acquired resistance (AR) to EGFR tyrosine kinase inhibitors (TKIs) identified by a transposon mutagenesis screen and clinical genomic testing. PD Fan, G Narzisi, A Jayaprakash, E Venturini, N Robine, P Smibert, ... Journal of Clinical Oncology 35 (15_suppl), 9043-9043, 2017 | 9 | 2017 |
| Marburg and ebola virus infections elicit a complex, muted inflammatory state in bats AD Jayaprakash, AJ Ronk, AN Prasad, MF Covington, KR Stein, ... Viruses 15 (2), 350, 2023 | 7 | 2023 |
| Analysis of mitochondrial DNA polymorphisms in the human cell lines HepaRG and SJCRH30 MJ Young, AD Jayaprakash, CKJ Young International Journal of Molecular Sciences 20 (13), 3245, 2019 | 5 | 2019 |
| Draft genome sequence of Bacillus alcalophilus AV1934, a classic alkaliphile isolated from human feces in 1934 O Attie, A Jayaprakash, H Shah, IT Paulsen, M Morino, Y Takahashi, ... Genome announcements 2 (6), 10.1128/genomea. 01175-14, 2014 | 5 | 2014 |
