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Naima Ahmed Fahmi
Naima Ahmed Fahmi
Verified email at knights.ucf.edu
Title
Cited by
Cited by
Year
Investigating Chaperonin-Containing TCP-1 subunit 2 as an essential component of the chaperonin complex for tumorigenesis
AE Showalter, AC Martini, D Nierenberg, K Hosang, NA Fahmi, ...
Scientific reports 10 (1), 798, 2020
472020
Pim-assembler: A processing-in-memory platform for genome assembly
S Angizi, NA Fahmi, W Zhang, D Fan
2020 57th ACM/IEEE design automation conference (DAC), 1-6, 2020
292020
mTOR-regulated U2af1 tandem exon splicing specifies transcriptome features for translational control
JW Chang, HS Yeh, M Park, L Erber, J Sun, S Cheng, AM Bui, NA Fahmi, ...
Nucleic acids research 47 (19), 10373-10387, 2019
182019
Transcriptional programming drives Ibrutinib-resistance evolution in mantle cell lymphoma
X Zhao, MY Wang, H Jiang, T Lwin, PM Park, J Gao, MB Meads, Y Ren, ...
Cell reports 34 (11), 2021
162021
As-quant: Detection and visualization of alternative splicing events with rna-seq data
NA Fahmi, H Nassereddeen, J Chang, M Park, H Yeh, J Sun, D Fan, ...
International journal of molecular sciences 22 (9), 4468, 2021
152021
Pim-quantifier: A processing-in-memory platform for mrna quantification
F Zhang, S Angizi, NA Fahmi, W Zhang, D Fan
2021 58th ACM/IEEE Design Automation Conference (DAC), 43-48, 2021
122021
APA-Scan: detection and visualization of 3′-UTR alternative polyadenylation with RNA-seq and 3′-end-seq data
NA Fahmi, KT Ahmed, JW Chang, H Nassereddeen, D Fan, J Yong, ...
BMC bioinformatics 23 (Suppl 3), 396, 2022
92022
APA-Scan: Detection and Visualization of 3’-UTR APA with RNA-seq and 3’-end-seq Data
NA Fahmi, JW Chang, H Nassereddeen, KT Ahmed, D Fan, J Yong, ...
BioRxiv, 2020
72020
mTOR contributes to the proteome diversity through transcriptome-wide alternative splicing
S Cheng, NA Fahmi, M Park, J Sun, K Thao, HS Yeh, W Zhang, J Yong
International journal of molecular sciences 23 (20), 12416, 2022
62022
Computational methods to study human transcript variants in COVID-19 infected lung cancer cells
J Sun, NA Fahmi, H Nassereddeen, S Cheng, I Martinez, D Fan, J Yong, ...
International journal of molecular sciences 22 (18), 9684, 2021
52021
53BP1-ACLY-SLBP-coordinated activation of replication-dependent histone biogenesis maintains genomic integrity
TT Wu, S Jun, EJ Choi, J Sun, EB Yang, HS Lee, SY Kim, NA Fahmi, ...
Nucleic acids research 50 (3), 1465-1483, 2022
22022
PANDA: Processing-in-MRAM Accelerated De Bruijn Graph based DNA Assembly
S Angizi, NA Fahmi, W Zhang, D Fan
arXiv preprint arXiv:2008.06177, 2020
12020
mTOR-driven widespread exon skipping renders multifaceted gene regulation and proteome complexity
S Cheng, NA Fahmi, M Park, JW Chang, J Sun, K Thao, HS Yeh, W Zhang, ...
bioRxiv, 2020.02. 27.967737, 2020
12020
PANDA: Processing in Magnetic Random-Access Memory-Accelerated de Bruijn Graph-Based DNA Assembly
S Angizi, NA Fahmi, D Najafi, W Zhang, D Fan
Journal of Low Power Electronics and Applications 14 (1), 9, 2024
2024
Computational Approaches to Study Post Transcriptional Regulation Events
NA Fahmi
2024
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