Duncan T Odom

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Paul FlicekThe Jackson Laboratory, University of CambridgeVerified email at jax.org
Michael D. WilsonUniversity of Toronto and SickKids Research InstituteVerified email at sickkids.ca
Claudia KutterPrincipal Investigator, Karolinska Institute and SciLifeLab fellow, Science for Life LaboratoryVerified email at ki.se
John MarioniGenentechVerified email at gene.com
Dominic SchmidtPartner at SynconaVerified email at wellcome.ac.uk
Stephen WattSanger InstituteVerified email at sanger.ac.uk
Diego VillarNon-clinical Lecturer, Blizard Institute, Queen Mary University of LondonVerified email at qmul.ac.uk
Celia Pilar Martinez-JimenezGroup Leader at Helmholtz Pioneer Campus (Helmholtz Zentrum München )Verified email at helmholtz-munich.de
Tim F. RaynerSenior Bioinformatician, MogrifyVerified email at mogrify.co.uk
Christina ErnstFunctional Genomics Team Leader, EMBL-EBIVerified email at ebi.ac.uk
Michaela FryeProfessor DKFZVerified email at dkfz.de
Angela GoncalvesHead of Research Group at DKFZ, Visiting Scientist at WT Sanger Institute, Darwin CollegeVerified email at dkfz.de
Sarah J AitkenYale University (US) & University of Cambridge (UK)Verified email at yale.edu
Benoit BallesterINSERM - National Institute of Health and Medical ResearchVerified email at inserm.fr
Teresa PalomeroProfessor of Pathology and Cell Biology at CUMCVerified email at cumc.columbia.edu
Thomas LookProfessor of Pediatrics, Harvard Medical SchoolVerified email at dfci.harvard.edu
Nuno Barbosa-MoraisResearch Group Leader, Instituto de Medicina Molecular - LisbonVerified email at medicina.ulisboa.pt
Nils ElingSenior Data Scientist, NovartisVerified email at novartis.com
Georg GerberAssistant Professor of Pathology, Harvard Medical SchoolVerified email at bwh.harvard.edu
Sandra BlancoCancer Research Institute Salamanca - CSICVerified email at usal.es

Duncan T Odom

University of Heidelberg & German Cancer Research Center/DKFZ

Verified email at dkfz-heidelberg.de - Homepage

cancer evolution regulatory genomics gene expression transition metal chemistry


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Transcriptional regulatory networks in Saccharomyces cerevisiae TI Lee, NJ Rinaldi, F Robert, DT Odom, Z Bar-Joseph, GK Gerber, ... science 298 (5594), 799-804, 2002	3912	2002
Control of developmental regulators by Polycomb in human embryonic stem cells TI Lee, RG Jenner, LA Boyer, MG Guenther, SS Levine, RM Kumar, ... Cell 125 (2), 301-313, 2006	2737	2006
Recognition and reaction of metallointercalators with DNA KE Erkkila, DT Odom, JK Barton Chemical Reviews 99, 2777-2796, 1999	2287	1999
Control of pancreas and liver gene expression by HNF transcription factors DT Odom, N Zizlsperger, DB Gordon, GW Bell, NJ Rinaldi, HL Murray, ... Science 303 (5662), 1378-1381, 2004	1677	2004
The evolutionary landscape of alternative splicing in vertebrate species NL Barbosa-Morais, M Irimia, Q Pan, HY Xiong, S Gueroussov, LJ Lee, ... Science 338 (6114), 1587-1593, 2012	1185	2012
Genome-wide analysis of cAMP-response element binding protein occupancy, phosphorylation, and target gene activation in human tissues X Zhang, DT Odom, SH Koo, MD Conkright, G Canettieri, J Best, H Chen, ... Proceedings of the National Academy of Sciences 102 (12), 4459-4464, 2005	1179	2005
NOTCH1 directly regulates c-MYC and activates a feed-forward-loop transcriptional network promoting leukemic cell growth T Palomero, WK Lim, DT Odom, ML Sulis, PJ Real, A Margolin, ... Proceedings of the National Academy of Sciences 103 (48), 18261-18266, 2006	1063	2006
Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding D Schmidt, MD Wilson, B Ballester, PC Schwalie, GD Brown, A Marshall, ... Science 328 (5981), 1036-1040, 2010	855	2010
Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169-175, 2012	840	2012
Enhancer evolution across 20 mammalian species D Villar, C Berthelot, S Aldridge, TF Rayner, M Lukk, M Pignatelli, TJ Park, ... Cell 160 (3), 554-566, 2015	794	2015
Comparative Hi-C reveals that CTCF underlies evolution of chromosomal domain architecture MV Rudan, C Barrington, S Henderson, C Ernst, DT Odom, A Tanay, ... Cell reports 10 (8), 1297-1309, 2015	782	2015
Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages D Schmidt, PC Schwalie, MD Wilson, B Ballester, Â Gonçalves, C Kutter, ... Cell 148 (1), 335-348, 2012	668	2012
Tissue-specific transcriptional regulation has diverged significantly between human and mouse DT Odom, RD Dowell, ES Jacobsen, W Gordon, TW Danford, ... Nature genetics 39 (6), 730-732, 2007	643	2007
ChIP-seq: using high-throughput sequencing to discover protein–DNA interactions D Schmidt, MD Wilson, C Spyrou, GD Brown, J Hadfield, DT Odom Methods 48 (3), 240-248, 2009	638	2009
Aberrant methylation of t RNA s links cellular stress to neuro‐developmental disorders S Blanco, S Dietmann, JV Flores, S Hussain, C Kutter, P Humphreys, ... The EMBO journal 33 (18), 2020-2039, 2014	594	2014
NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs S Hussain, AA Sajini, S Blanco, S Dietmann, P Lombard, Y Sugimoto, ... Cell reports 4 (2), 255-261, 2013	532	2013
A CTCF-independent role for cohesin in tissue-specific transcription D Schmidt, PC Schwalie, CS Ross-Innes, A Hurtado, GD Brown, ... Genome research 20 (5), 578-588, 2010	453	2010
CTCF and cohesin: linking gene regulatory elements with their targets M Merkenschlager, DT Odom Cell 152 (6), 1285-1297, 2013	417	2013
Gibbon genome and the fast karyotype evolution of small apes L Carbone, R Alan Harris, S Gnerre, KR Veeramah, B Lorente-Galdos, ... Nature 513 (7517), 195-201, 2014	384	2014
Integrative detection and analysis of structural variation in cancer genomes JR Dixon, J Xu, V Dileep, Y Zhan, F Song, VT Le, GG Yardımcı, ... Nature genetics 50 (10), 1388-1398, 2018	358	2018

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