| Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress KY Yun, MR Park, B Mohanty, V Herath, F Xu, R Mauleon, E Wijaya, ... BMC plant biology 10, 1-29, 2010 | 236 | 2010 |
| Supra‐optimal expression of the cold‐regulated OsMyb4 transcription factor in transgenic rice changes the complexity of transcriptional network with major effects … MR PARK, KILY YUN, B Mohanty, V Herath, F Xu, E Wijaya, VB Bajic, ... Plant, cell & environment 33 (12), 2209-2230, 2010 | 138 | 2010 |
| Transcriptomics analysis of salt stress tolerance in the roots of the mangrove Avicennia officinalis P Krishnamurthy, B Mohanty, E Wijaya, DY Lee, TM Lim, Q Lin, J Xu, ... Scientific Reports 7 (1), 10031, 2017 | 81 | 2017 |
| Hydroxypropyl-β-cyclodextrin spikes local inflammation that induces Th2 cell and T follicular helper cell responses to the coadministered antigen M Onishi, K Ozasa, K Kobiyama, K Ohata, M Kitano, K Taniguchi, ... The Journal of Immunology 194 (6), 2673-2682, 2015 | 75 | 2015 |
| MotifVoter: a novel ensemble method for fine-grained integration of generic motif finders E Wijaya, SM Yiu, NT Son, R Kanagasabai, WK Sung Bioinformatics 24 (20), 2288-2295, 2008 | 63 | 2008 |
| Recount: expectation maximization based error correction tool for next generation sequencing data E Wijaya, MC Frith, Y Suzuki, P Horton Genome Informatics 2009: Genome Informatics Series Vol. 23, 189-201, 2009 | 55 | 2009 |
| Advax, a delta inulin microparticle, potentiates in-built adjuvant property of co-administered vaccines M Hayashi, T Aoshi, Y Haseda, K Kobiyama, E Wijaya, N Nakatsu, ... EBioMedicine 15, 127-136, 2017 | 46 | 2017 |
| Detection of generic spaced motifs using submotif pattern mining E Wijaya, K Rajaraman, SM Yiu, WK Sung Bioinformatics 23 (12), 1476-1485, 2007 | 46 | 2007 |
| Chromatin accessibility identifies diversity in mesenchymal stem cells from different tissue origins YT Ho, T Shimbo, E Wijaya, Y Ouchi, E Takaki, R Yamamoto, Y Kikuchi, ... Scientific reports 8 (1), 17765, 2018 | 40 | 2018 |
| Longitudinal single-cell transcriptomics reveals a role for Serpina3n-mediated resolution of inflammation in a mouse colitis model YT Ho, T Shimbo, E Wijaya, T Kitayama, S Takaki, K Ikegami, K Miyashita, ... Cellular and molecular gastroenterology and hepatology 12 (2), 547-566, 2021 | 36 | 2021 |
| Identification of salt gland-associated genes and characterization of a dehydrin from the salt secretor mangrove Avicennia officinalis PA Jyothi-Prakash, B Mohanty, E Wijaya, TM Lim, Q Lin, CS Loh, ... BMC plant biology 14, 1-16, 2014 | 32 | 2014 |
| Patterns of cis-element enrichment reveal potential regulatory modules involved in the transcriptional regulation of anoxia response of japonica rice B Mohanty, V Herath, E Wijaya, HC Yeo, BG de Los Reyes, DY Lee Gene 511 (2), 235-242, 2012 | 26 | 2012 |
| Probabilistic alignments with quality scores: an application to short-read mapping toward accurate SNP/indel detection M Hamada, E Wijaya, MC Frith, K Asai Bioinformatics 27 (22), 3085-3092, 2011 | 24 | 2011 |
| A hormone-responsive C1-domain-containing protein At5g17960 mediates stress response in Arabidopsis thaliana RV Bhaskar, B Mohanty, V Verma, E Wijaya, PP Kumar PloS one 10 (1), e0115418, 2015 | 19 | 2015 |
| Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for cell survival under complete submergence B Mohanty, H Takahashi, BG de Los Reyes, E Wijaya, M Nakazono, ... Rice 9, 1-8, 2016 | 17 | 2016 |
| Finding protein-coding genes through human polymorphisms E Wijaya, MC Frith, P Horton, K Asai PloS one 8 (1), e54210, 2013 | 12 | 2013 |
| Quantifying the relative immune cell activation from whole tissue/organ-derived differentially expressed gene data E Wijaya, Y Igarashi, N Nakatsu, Y Haseda, J Billaud, YA Chen, ... Scientific Reports 7 (1), 12847, 2017 | 6 | 2017 |
| Mapping circulating serum miRNAs to their immune-related target mRNAs B Nosirov, J Billaud, A Vandenbon, D Diez, E Wijaya, KJ Ishii, ... Advances and Applications in Bioinformatics and Chemistry, 1-9, 2017 | 6 | 2017 |
| Reference-free prediction of rearrangement breakpoint reads E Wijaya, K Shimizu, K Asai, M Hamada Bioinformatics 30 (18), 2559-2567, 2014 | 6 | 2014 |
| Modeling the marginal distribution of gene expression with mixture models E Wijaya, H Harada, P Horton 2008 Second International Conference on Future Generation Communication and …, 2008 | 5 | 2008 |
