| Hierarchical structures of amorphous solids characterized by persistent homology Y Hiraoka, T Nakamura, A Hirata, EG Escolar, K Matsue, Y Nishiura Proceedings of the National Academy of Sciences 113 (26), 7035-7040, 2016 | 249 | 2016 |
| Persistent homology and many-body atomic structure for medium-range order in the glass T Nakamura, Y Hiraoka, A Hirata, EG Escolar, Y Nishiura Nanotechnology 26 (30), 304001, 2015 | 107 | 2015 |
| Experimental test of a new equality: Measuring heat dissipation in an optically driven colloidal system S Toyabe, HR Jiang, T Nakamura, Y Murayama, M Sano Physical Review E 75 (1), 011122, 2007 | 58 | 2007 |
| Free energy analysis of vesicle-to-bicelle transformation W Shinoda, T Nakamura, SO Nielsen Soft Matter 7 (19), 9012-9020, 2011 | 44 | 2011 |
| Effect of the Cation on the Stability of Cation–Glyme Complexes and their Interactions with the [TFSA]− Anion S Tsuzuki, T Mandai, S Suzuki, W Shinoda, T Nakamura, T Morishita, ... Physical Chemistry Chemical Physics 19 (28), 18262-18272, 2017 | 39 | 2017 |
| Novel numerical method for calculating the pressure tensor in spherical coordinates for molecular systems T Nakamura, W Shinoda, T Ikeshoji The Journal of chemical physics 135 (9), 094106, 2011 | 34 | 2011 |
| A guiding potential method for evaluating the bending rigidity of tensionless lipid membranes from molecular simulation S Kawamoto, T Nakamura, SO Nielsen, W Shinoda The Journal of chemical physics 139 (3), 07B613_1, 2013 | 26 | 2013 |
| Structure and properties of densified silica glass: Characterizing the order within disorder Y Onodera, S Kohara, PS Salmon, A Hirata, N Nishiyama, S Kitani, ... NPG Asia Materials 12 (1), 1-16, 2020 | 24 | 2020 |
| Precise calculation of the local pressure tensor in Cartesian and spherical coordinates in LAMMPS T Nakamura, S Kawamoto, W Shinoda Computer Physics Communications 190, 120-128, 2015 | 20 | 2015 |
| Derivation of the nonlinear fluctuating hydrodynamic equation from the underdamped Langevin equation T Nakamura, A Yoshimori Journal of Physics A: Mathematical and Theoretical 42 (6), 065001, 2009 | 18 | 2009 |
| Method of evaluating curvature-dependent elastic parameters for small unilamellar vesicles using molecular dynamics trajectory T Nakamura, W Shinoda The Journal of Chemical Physics 138 (12), 124903, 2013 | 15 | 2013 |
| Description of medium-range order in amorphous structures by persistent homology T Nakamura, Y Hiraoka, A Hirata, EG Escolar, K Matsue, Y Nishiura arXiv preprint arXiv:1501.03611, 2015 | 13 | 2015 |
| Fluctuation-response relation of many Brownian particles under nonequilibrium conditions T Nakamura, S Sasa Physical Review E 77 (2), 021108, 2008 | 13 | 2008 |
| Persistence homology of entangled rings F Landuzzi, T Nakamura, D Michieletto, T Sakaue Physical Review Research 2 (3), 033529, 2020 | 9 | 2020 |
| Systematic derivation of coarse-grained fluctuating hydrodynamic equations for many Brownian particles under nonequilibrium conditions T Nakamura, S Sasa Physical Review E 74 (3), 031105, 2006 | 5 | 2006 |
| Effects of anion on liquid structures of ionic liquids at graphene electrode interface analyzed by molecular dynamics simulations S Tsuzuki, T Nakamura, T Morishita, W Shinoda, S Seki, Y Umebayashi, ... Batteries & Supercaps 3 (7), 658-667, 2020 | 4 | 2020 |
| Microscopic description of yielding in glass based on persistent homology T Shirai, T Nakamura Journal of the Physical Society of Japan 88 (7), 074801, 2019 | 4 | 2019 |
| Isokinetic approach in logarithmic mean-force dynamics for on-the-fly free energy reconstruction T Morishita, T Nakamura, W Shinoda, AM Ito Chemical Physics Letters 706, 633-640, 2018 | 2 | 2018 |
| The Unique and Physical Definition of the Free-Energy Landscape T Nakamura arXiv preprint arXiv:1803.09034, 2018 | 2* | 2018 |
| Anomalous time correlation in two-dimensional driven diffusive systems T Nakamura, M Otsuki, S Sasa Physical Review E 71 (6), 061107, 2005 | 2 | 2005 |
