| Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences M Miya, H Takeshima, H Endo, NB Ishiguro, JG Inoue, T Mukai, TP Satoh, ... Molecular phylogenetics and evolution 26 (1), 121-138, 2003 | 906 | 2003 |
| Best practices for justifying fossil calibrations JF Parham, PCJ Donoghue, CJ Bell, TD Calway, JJ Head, PA Holroyd, ... Systematic Biology 61 (2), 346-359, 2012 | 694 | 2012 |
| Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny M dos Reis, J Inoue, M Hasegawa, RJ Asher, PCJ Donoghue, Z Yang Proceedings of the Royal Society B: Biological Sciences 279 (1742), 3491-3500, 2012 | 556 | 2012 |
| Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the “ancient fish” JG Inoue, M Miya, K Tsukamoto, M Nishida Molecular phylogenetics and evolution 26 (1), 110-120, 2003 | 363 | 2003 |
| A mitogenomic perspective on the basal teleostean phylogeny: resolving higher-level relationships with longer DNA sequences JG Inoue, M Miya, K Tsukamoto, M Nishida Molecular Phylogenetics and Evolution 20 (2), 275-285, 2001 | 269 | 2001 |
| The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times J Inoue, PCJ Donoghue, Z Yang Systematic biology 59 (1), 74-89, 2010 | 262 | 2010 |
| Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspective JG Inoue, M Miya, K Lam, BH Tay, JA Danks, J Bell, TI Walker, ... Molecular biology and evolution 27 (11), 2576-2586, 2010 | 251 | 2010 |
| Mitochondrial genomics of ostariophysan fishes: perspectives on phylogeny and biogeography K Saitoh, M Miya, JG Inoue, NB Ishiguro, M Nishida Journal of Molecular Evolution 56, 464-472, 2003 | 239 | 2003 |
| Molecular phylogeny and evolution of the freshwater eels genus Anguilla based on the whole mitochondrial genome sequences Y Minegishi, J Aoyama, JG Inoue, M Miya, M Nishida, K Tsukamoto Molecular Phylogenetics and Evolution 34 (1), 134-146, 2005 | 227 | 2005 |
| Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea) NC Aschliman, M Nishida, M Miya, JG Inoue, KM Rosana, GJP Naylor Molecular Phylogenetics and Evolution 63 (1), 28-42, 2012 | 226 | 2012 |
| Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus JG Inoue, M Miya, K Tsukamoto, M Nishida Fisheries science 66 (5), 924-932, 2000 | 203 | 2000 |
| Evolutionary origin of the Scombridae (tunas and mackerels): members of a Paleogene adaptive radiation with 14 other pelagic fish families M Miya, M Friedman, TP Satoh, H Takeshima, T Sado, W Iwasaki, ... PloS one 8 (9), e73535, 2013 | 192 | 2013 |
| Deep-ocean origin of the freshwater eels JG Inoue, M Miya, MJ Miller, T Sado, R Hanel, K Hatooka, J Aoyama, ... Biology Letters 6 (3), 363-366, 2010 | 189 | 2010 |
| Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling J Inoue, Y Sato, R Sinclair, K Tsukamoto, M Nishida Proceedings of the National Academy of Sciences 112 (48), 14918-14923, 2015 | 186 | 2015 |
| The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two … JG Inoue, M Miya, B Venkatesh, M Nishida Gene 349, 227-235, 2005 | 162 | 2005 |
| Interrelationships of the 11 gasterosteiform families (sticklebacks, pipefishes, and their relatives): a new perspective based on whole mitogenome sequences from 75 higher teleosts R Kawahara, M Miya, K Mabuchi, S Lavoué, JG Inoue, TP Satoh, ... Molecular phylogenetics and evolution 46 (1), 224-236, 2008 | 148 | 2008 |
| Mitogenomic evidence for the monophyly of elopomorph fishes (Teleostei) and the evolutionary origin of the leptocephalus larva JG Inoue, M Miya, K Tsukamoto, M Nishida Molecular Phylogenetics and Evolution 32 (1), 274-286, 2004 | 146 | 2004 |
| The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes Y Yamanoue, M Miya, JG Inoue, K Matsuura, M Nishida Genes & genetic systems 81 (1), 29-39, 2006 | 138 | 2006 |
| A key metabolic gene for recurrent freshwater colonization and radiation in fishes A Ishikawa, N Kabeya, K Ikeya, R Kakioka, JN Cech, N Osada, MC Leal, ... Science 364 (6443), 886-889, 2019 | 135 | 2019 |
| Evolution of the deep-sea gulper eel mitochondrial genomes: large-scale gene rearrangements originated within the eels JG Inoue, M Miya, K Tsukamoto, M Nishida Molecular biology and evolution 20 (11), 1917-1924, 2003 | 133 | 2003 |
