フォロー
Thomas R. Sokolowski
Thomas R. Sokolowski
Group Leader, Frankfurt Institute for Advanced Studies (FIAS)
確認したメール アドレス: fias.uni-frankfurt.de - ホームページ
タイトル
引用先
引用先
Mutual repression enhances the steepness and precision of gene expression boundaries
TR Sokolowski, T Erdmann, PR Ten Wolde
PLoS Comput Biol 8 (8), e1002654, 2012
662012
Optimizing information flow in small genetic networks. IV. Spatial coupling
TR Sokolowski, G Tkačik
Phys Rev E 91 (6), 062710, 2015
482015
eGFRD in all dimensions
TR Sokolowski, J Paijmans, L Bossen, M Wehrens, T Miedema, ...
J Chem Phys 150 (5), 054108, 2019
472019
Statistical analysis and optimality of neural systems
W Młynarski, M Hledík, TR Sokolowski, G Tkačik
Neuron 109 (7), 1227-1241. e5, 2021
332021
Extending the dynamic range of transcription factor action by translational regulation
TR Sokolowski, AM Walczak, W Bialek, G Tkačik
Phys Rev E 93 (2), 022404, 2016
122016
Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells
P Recouvreux, TR Sokolowski, A Grammoustianou, PR ten Wolde, ...
Proc Natl Acad Sci USA 113 (7), 1811-1816, 2016
102016
Spatial-Stochastic Simulation of Reaction-Diffusion Systems
TR Sokolowski, PR ten Wolde
B Munsky, WS Hlavacek, LS Tsimring (ed.), "Quantitative Biology: Theory …, 2018
92018
A Tight Upper Bound on Mutual Information
M Hledík, TR Sokolowski, G Tkačik
2019 IEEE Information Theory Workshop (ITW), 1-5, 2019
72019
Deriving a genetic regulatory network from an optimization principle
TR Sokolowski, T Gregor, W Bialek, G Tkačik
arXiv preprint arXiv:2302.05680, 2023
52023
A computational study of robust formation of spatial protein patterns
TR Sokolowski
Ph.D. thesis, Vrije Universiteit Amsterdam, ISBN 978-90-77209-72-1 …, 2013
52013
Green’s Function Reaction Dynamics—An Exact and Efficient Way To simulate Intracellular Pattern Formation
T Sokolowski, L Bossen, T Miedema, N Becker
AIP Conference Proceedings 1281 (1), 1342-1345, 2010
32010
Long-range k-core percolation
CF Moukarzel, T Sokolowski
J. Phys.: Conf. Ser 246, 012019, 2010
32010
Comparing AI versus Optimization Workflows for Simulation-Based Inference of Spatial-Stochastic Systems
MA Ramirez Sierra, TR Sokolowski
arXiv preprint arXiv:2407.10938, 2024
22024
Stable developmental patterns of gene expression without morphogen gradients
M Majka, NB Becker, PR Wolde, M Zagorski, TR Sokolowski
PLoS Computational Biology 20 (12), e1012555, 2024
12024
AI-powered simulation-based inference of a genuinely spatial-stochastic model of early mouse embryogenesis
MA Ramírez Sierra, TR Sokolowski
PLoS Computational Biology 20 (11), e1012473, 2024
12024
Information theory entering soils and tissues
TR Sokolowski
Cell Systems 13 (7), 511-513, 2022
12022
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