Molecular dynamics simulations of human antimicrobial peptide LL-37 in model POPC and POPG lipid bilayers L Zhao, Z Cao, Y Bian, G Hu, J Wang, Y Zhou International journal of molecular sciences 19 (4), 1186, 2018 | 68 | 2018 |
EVLncRNAs 2.0: an updated database of manually curated functional long non-coding RNAs validated by low-throughput experiments B Zhou, B Ji, K Liu, G Hu, F Wang, Q Chen, R Yu, P Huang, J Ren, C Guo, ... Nucleic acids research 49 (D1), D86-D91, 2021 | 57 | 2021 |
Atomistic picture for the folding pathway of a hybrid-1 type human telomeric DNA G-quadruplex Y Bian, C Tan, J Wang, Y Sheng, J Zhang, W Wang PLoS computational biology 10 (4), e1003562, 2014 | 52 | 2014 |
Indole/isatin‐containing hybrids as potential antibacterial agents F Song, Z Li, Y Bian, X Huo, J Fang, L Shao, M Zhou Archiv der Pharmazie 353 (10), 2000143, 2020 | 41 | 2020 |
Unexpected position-dependent effects of ribose G-quartets in G-quadruplexes J Zhou, S Amrane, F Rosu, GF Salgado, Y Bian, H Tateishi-Karimata, ... Journal of the American Chemical Society 139 (23), 7768-7779, 2017 | 30 | 2017 |
Indole alkaloids, synthetic dimers and hybrids with potential in vivo anticancer activity F Song, Y Bian, J Liu, Z Li, L Zhao, J Fang, Y Lai, M Zhou Current Topics in Medicinal Chemistry 21 (5), 377-403, 2021 | 26 | 2021 |
Free energy landscape and multiple folding pathways of an H-type RNA pseudoknot Y Bian, J Zhang, J Wang, J Wang, W Wang PLoS One 10 (6), e0129089, 2015 | 25 | 2015 |
RNA fragment modeling with a nucleobase discrete-state model J Zhang, Y Bian, H Lin, W Wang Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 85 (2 …, 2012 | 25 | 2012 |
The antibacterial activity of quinazoline and quinazolinone hybrids Z Li, L Zhao, Y Bian, Y Li, J Qu, F Song Current Topics in Medicinal Chemistry 22 (12), 1035-1044, 2022 | 20 | 2022 |
Bias-exchange metadynamics simulation of membrane permeation of 20 amino acids Z Cao, Y Bian, G Hu, L Zhao, Z Kong, Y Yang, J Wang, Y Zhou International Journal of Molecular Sciences 19 (3), 885, 2018 | 18 | 2018 |
Exploration of the folding dynamics of human telomeric G-quadruplex with a hybrid atomistic structure-based model Y Bian, W Ren, F Song, J Yu, J Wang The Journal of Chemical Physics 148 (20), 2018 | 14 | 2018 |
Two-dimensional ZnO/BlueP van der Waals heterostructure used for visible-light driven water splitting: a first-principles study Z Zhao, C Yang, Z Cao, Y Bian, B Li, Y Wei Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 278, 121359, 2022 | 13 | 2022 |
On the accuracy of metadynamics and its variations in a protein folding process WW Yunqiang Bian, Jian Zhang, Jun Wang Molecular Simulation 41 (9), 752-763, 2015 | 13 | 2015 |
Interplay of hydrophobic and hydrophilic interactions in sequence-dependent cell penetration of spontaneous membrane-translocating peptides revealed by bias-exchange … Z Cao, L Liu, G Hu, Y Bian, H Li, J Wang, Y Zhou Biochimica et Biophysica Acta (BBA)-Biomembranes 1862 (10), 183402, 2020 | 12 | 2020 |
Atomistic analysis of ToxN and ToxI complex unbinding mechanism G Hu, X Yu, Y Bian, Z Cao, S Xu, L Zhao, B Ji, W Wang, J Wang International Journal of Molecular Sciences 19 (11), 3524, 2018 | 12 | 2018 |
Insights into the kinetic partitioning folding dynamics of the human telomeric G-quadruplex from molecular simulations and machine learning Y Bian, F Song, J Zhang, J Yu, J Wang, W Wang Journal of Chemical Theory and Computation 16 (9), 5936-5947, 2020 | 10 | 2020 |
Fast-folding pathways of the thrombin-binding aptamer G-quadruplex revealed by a markov state model Y Bian, F Song, Z Cao, L Zhao, J Yu, X Guo, J Wang Biophysical Journal 114 (7), 1529-1538, 2018 | 10 | 2018 |
Self-derived structure-disrupting peptides targeting methionine aminopeptidase in pathogenic bacteria: a new strategy to generate antimicrobial peptides YZ Jian Zhan, Husen Jia, Evgeny A. Semchenko, Yunqiang Bian, Amy M. Zhou ... The FASEB Journal, 2018 | 9 | 2018 |
Structure-based simulations complemented by conventional all-atom simulations to provide new insights into the folding dynamics of human telomeric G-quadruplex YQ Bian, F Song, ZX Cao, JF Yu, JH Wang Chinese Physics B 30 (7), 078702, 2021 | 3 | 2021 |
Deciphering the molecular mechanism of DNA-protein interactive co-condensates C Li, Y Bian, Y Tang, L Meng, P Yin, Y Hong, J Cheng, Y Li, J Lin, C Tang, ... | 1 | 2024 |