Determining the critical nucleus and mechanism of fibril elongation of the Alzheimer’s Aβ1–40 peptide NL Fawzi, Y Okabe, EH Yap, T Head-Gordon Journal of molecular biology 365 (2), 535-550, 2007 | 107 | 2007 |
Advanced potential energy surfaces for condensed phase simulation O Demerdash, EH Yap, T Head-Gordon Annual review of physical chemistry 65, 149-174, 2014 | 77 | 2014 |
A coarse‐grained α‐carbon protein model with anisotropic hydrogen‐bonding EH Yap, NL Fawzi, T Head‐Gordon Proteins: Structure, Function, and Bioinformatics 70 (3), 626-638, 2008 | 70 | 2008 |
Contrasting disease and nondisease protein aggregation by molecular simulation NL Fawzi, EH Yap, Y Okabe, KL Kohlstedt, SP Brown, T Head-Gordon Accounts of chemical research 41 (8), 1037-1047, 2008 | 38 | 2008 |
A P425R mutation of the proton-coupled folate transporter causing hereditary folate malabsorption produces a highly selective alteration in folate binding DS Shin, R Zhao, EH Yap, A Fiser, ID Goldman American Journal of Physiology-Cell Physiology 302 (9), C1405-C1412, 2012 | 37 | 2012 |
2-(m-Azidobenzoyl) taxol binds differentially to distinct β-tubulin isotypes CPH Yang, EH Yap, H Xiao, A Fiser, SB Horwitz Proceedings of the National Academy of Sciences 113 (40), 11294-11299, 2016 | 32 | 2016 |
New and Efficient Poisson− Boltzmann Solver for Interaction of Multiple Proteins EH Yap, T Head-Gordon Journal of chemical theory and computation 6 (7), 2214-2224, 2010 | 32 | 2010 |
Functional clustering of immunoglobulin superfamily proteins with protein–protein interaction information calibrated hidden Markov model sequence profiles EH Yap, T Rosche, S Almo, A Fiser Journal of molecular biology 426 (4), 945-961, 2014 | 28 | 2014 |
Calculating the bimolecular rate of protein–protein association with interacting crowders EH Yap, T Head-Gordon Journal of chemical theory and computation 9 (5), 2481-2489, 2013 | 17 | 2013 |
ProtLID, a residue-based pharmacophore approach to identify cognate protein ligands in the immunoglobulin superfamily EH Yap, A Fiser Structure 24 (12), 2217-2226, 2016 | 15 | 2016 |
PB‐AM: An open‐source, fully analytical linear Poisson‐Boltzmann solver LE Felberg, DH Brookes, EH Yap, E Jurrus, NA Baker, T Head‐Gordon Journal of computational chemistry 38 (15), 1275-1282, 2017 | 13 | 2017 |
Nuc‐ErbB3 regulates H3K27me3 levels and HMT activity to establish epigenetic repression during peripheral myelination JK Ness, AA Skiles, EH Yap, EJ Fajardo, A Fiser, N Tapinos Glia 64 (6), 977-992, 2016 | 10 | 2016 |
Residue-based pharmacophore method for identifying cognate protein ligands A Fiser, E Yap US Patent 11,435,355, 2022 | | 2022 |
PB-SAM, a novel solution to the Poisson-Boltzmann equation for applications ranging from protein simulations to polymer membrane design L Felberg, M Soniat, D Brookes, E Yap, T Head-Gordon ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 252, 2016 | | 2016 |
PB-SAM: A novel solution to the Poison-Boltzmann equation, for applications in polymer membrane design L Felberg, EH Yap, T Head-Gordon ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 248, 2014 | | 2014 |
Dependence of the biomolecular rate of protein-protein association under crowding conditions T Head-Gordon, E Yap ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 244, 2012 | | 2012 |
Computational modeling of protein interactions at multiple lengthscales EH Yap University of California, Berkeley, 2010 | | 2010 |
PHYS 64-Multiscale simulation of protein association using an efficient multipole-based Poisson-Boltzmann solver EH Yap, I Lotan, DE Shaw, T Head-Gordon ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 236, 2008 | | 2008 |
PHYS 422-A physics-based, coarse-grained model with orientation-dependent hydrogen bond potential for investigating protein folding EH Yap, NL Fawzi, T Head-Gordon ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 232, 2006 | | 2006 |
BIOT 201-Molecular simulations of fibril stability and elongation of the Alzheimer's A beta 1-40 peptide NL Fawzi, EH Yap, T Head-Gordon ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 232, 2006 | | 2006 |