| Loss of conformational entropy in protein folding calculated using realistic ensembles and its implications for NMR-based calculations MC Baxa, EJ Haddadian, JM Jumper, KF Freed, TR Sosnick Proceedings of the National Academy of Sciences 111 (43), 15396-15401, 2014 | 118 | 2014 |
| The 2.5 Å structure of CD1c in complex with a mycobacterial lipid reveals an open groove ideally suited for diverse antigen presentation L Scharf, NS Li, AJ Hawk, D Garzón, T Zhang, LM Fox, AR Kazen, S Shah, ... Immunity 33 (6), 853-862, 2010 | 118 | 2010 |
| In Silico Models for the Human α4β2 Nicotinic Acetylcholine Receptor EJ Haddadian, MH Cheng, RD Coalson, Y Xu, P Tang The Journal of Physical Chemistry B 112 (44), 13981-13990, 2008 | 55 | 2008 |
| Molecular origins of cofilin-linked changes in actin filament mechanics J Fan, M Saunders, E Haddadian, K Freed, E De La Cruz, G Voth Biophysical Journal 104 (2), 549a-550a, 2013 | 51 | 2013 |
| A Brownian dynamics study of the interactions of the luminal domains of the cytochrome b6f complex with plastocyanin and cytochrome c6: the effects of the Rieske FeS protein on … EJ Haddadian, EL Gross Biophysical journal 91 (7), 2589-2600, 2006 | 43 | 2006 |
| Brownian dynamics study of cytochrome f interactions with cytochrome c6 and plastocyanin in Chlamydomonas reinhardtii plastocyanin, and cytochrome c6 mutants EJ Haddadian, EL Gross Biophysical journal 88 (3), 2323-2339, 2005 | 38 | 2005 |
| Context and force field dependence of the loss of protein backbone entropy upon folding using realistic denatured and native state ensembles MC Baxa, EJ Haddadian, AK Jha, KF Freed, TR Sosnick Journal of the American Chemical Society 134 (38), 15929-15936, 2012 | 34 | 2012 |
| A Brownian dynamics study of the effects of cytochrome f structure and deletion of its small domain in interactions with cytochrome c6 and plastocyanin in Chlamydomonas reinhardtii EJ Haddadian, EL Gross Biophysical journal 90 (2), 566-577, 2006 | 29 | 2006 |
| Automated real-space refinement of protein structures using a realistic backbone move set EJ Haddadian, H Gong, AK Jha, X Yang, J DeBartolo, JR Hinshaw, ... Biophysical journal 101 (4), 899-909, 2011 | 28 | 2011 |
| Higher susceptibility to halothane modulation in open-than in closed-channel α4β2 nAChR revealed by molecular dynamics simulations LT Liu, EJ Haddadian, D Willenbring, Y Xu, P Tang The Journal of Physical Chemistry B 114 (1), 626-632, 2010 | 25 | 2010 |
| Unresponsive correlated motion in α7 nAChR to halothane binding explains its functional insensitivity to volatile anesthetics D Mowrey, EJ Haddadian, LT Liu, D Willenbring, Y Xu, P Tang The Journal of Physical Chemistry B 114 (22), 7649-7655, 2010 | 23 | 2010 |
| A novel implicit solvent model for simulating the molecular dynamics of RNA Y Liu, E Haddadian, TR Sosnick, KF Freed, H Gong Biophysical journal 105 (5), 1248-1257, 2013 | 22 | 2013 |
| Comparative study of the collective dynamics of proteins and inorganic nanoparticles EJ Haddadian, H Zhang, KF Freed, JF Douglas Scientific reports 7 (1), 41671, 2017 | 17 | 2017 |
| Molecular dynamics study of water channels in natural and synthetic amyloid-β fibrils SR Natesh, AR Hummels, JR Sachleben, TR Sosnick, KF Freed, ... The Journal of Chemical Physics 154 (23), 2021 | 2 | 2021 |
| A Dynamical Model for Insulin Degrading Enzyme Conformational Transition between Closed and Open States MF Cronin, W Yu, WJ Tang, EJ Haddadian Biophysical Journal 114 (3), 524a, 2018 | 2 | 2018 |
| Membrane bilayers help to stabilize and are affected by Aβ-fibrils on the surface: a molecular dynamics study SR Natesh, KF Freed, EJ Haddadian Biophysical Journal 112 (3), 363a, 2017 | 2 | 2017 |
| Aβ Fibrils Act as Aqueous Pores: A Molecular Dynamics Study SR Natesh, SC Meredith, TR Sosnick, KF Freed, EJ Haddadian Biophysical Journal 110 (3), 553a, 2016 | 2 | 2016 |
| Automated real-space refinement of protein crystal structures using a realistic backbone move set EJ Haddadian, H Gong, AK Jha, X Yang, J DeBartolo, JR Hinshaw, ... Biophysical Journal 100 (3), 312a, 2011 | 1 | 2011 |
| Structure determination of amyloid-β oligomers (40-, 42-residues) with AlphaFold2 GS Mitchell, EJ Haddadian Biophysical Journal 123 (3), 71a, 2024 | | 2024 |
| Altered free energy landscape of insulin degrading enzyme in the presence of insulin: A molecular dynamics study D Dang, EJ Haddadian Biophysical Journal 123 (3), 341a, 2024 | | 2024 |
